Streptomyces griseoviridis: ELQ87_26350
Help
Entry
ELQ87_26350 CDS
T06660
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELQ87_26350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgd03019
]
ELQ87_26350
03009 Ribosome biogenesis [BR:
sgd03009
]
ELQ87_26350
Enzymes [BR:
sgd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ELQ87_26350
Messenger RNA biogenesis [BR:
sgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ELQ87_26350
Ribosome biogenesis [BR:
sgd03009
]
Prokaryotic type
rRNA processing factors
ELQ87_26350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AZS87354
UniProt:
A0A3Q9KQV3
LinkDB
All DBs
Position
5875220..5879290
Genome browser
AA seq
1356 aa
AA seq
DB search
MLEPTEPEEGSELNSPSDTLPPRRRRRAASRPAGPPAGPAATPEEIVAPAEAEQKPDENV
EAPEAEEAVVAEAAPAARPRRRATRRAAAPAGSPAAADSPAVAETVVPAADAAAPEESAV
AETEAVPETPAVSEDDAPRRPRRRATRRATAPTGAPDAAEAAEIVVPVAEETPAEAPAVA
EAPAEEAEPAVRGRRRATRRASAPAGAPKGAEKTELPEQQAEPDAVTEAPAAAAEPAVED
DDSAPRRGRRRATRRVTAPAETPAVAEEAPAAVAVAETPVAEVPAPADAEDAPRRARRRS
VRKAATGFSAPAPETDSPRRPARPAVAVFQAPVFTEPRFQTPERAAAEAAAGVAEPEGPD
DTEAADHRDDTAEAPREATRAAKAPAADEEQSAGSRRRRRRRGAASDEAETQAPEPVVED
EPEEADADAEDGHDGDDDSEDTGSRRRRRRGGRRRRRGDSADAGGDDESDEHDDTDEHAP
RDDSAEAGDAEQADDADDDADSDDADVRSGDSGGSNSSSRRRRRRRRRAGDNGTDGEPGD
NDPERTVVKVREPRKQSEPSDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLA
RREAVERVMVVRQHGDRTQIGVLEDGVLVEHYVNKEQSTSYVGNVYLGKVQNVLPSMEAA
FIDIGKGRNAVLYAGEVNFEALGMANGPRRIESALKSGQSVLVQVTKDPIGHKGARLTSQ
VSLPGRYLVYVPEGSMTGISRKLPDTERARLKTILKKIVPEDAGVIVRTAAEGASEDELR
RDVERLQAQWEEIQKKAKGGNAPTLLYGEPDMTVRVVRDIFNEDFTKVVVSGDEAWSTIH
GYVAHVAPDLADRLSKWTSEVDVFATYRIDEQLAKALDRKVWLPSGGSLVIDRTEAMIVV
DVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDLGGIIVIDFIDMVLESNRDLVLR
RLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMEQPGS
AGGGGKRKKRGRGGDGHTHEAAHSVESADGLDEDTESESVAEVAAEAAEPVALPGPEFTP
DEELYSSVAEAEAAARGRSRRRTSRRASAPAGAPSRSEQREQREQRDERERRDEPRAEAP
KAEAPVVETPAEVALAEPAAVEDAVVPAPAQVEAPAADEAAPKGRTRRRATRKVSAPAGS
PAGAEAAVVTVAEAAPVAEAPAEQPAQPVQAEQPAAEAAPARPRRRAVRKATAPTASGEA
AVVVVPSAAPEAVTEAAEAPAEAPAEAPEPAPAKKTAARKTAAKKAPAKKAAPAKKAAAK
KTVAKKATTKKAAAKKTTTAKTAAKKTSVSSAGDEA
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccgaccgaacccgaagagggttccgaactgaacagccccagcgacaccctg
ccgccgcgtcgtcggcgccgtgccgcctcacgcccggcgggaccgcccgccggacccgcg
gcgactcccgaggagatcgtcgcgcccgccgaggcggagcagaagcccgacgagaacgtc
gaggctcccgaggccgaggaagccgtcgtggccgaggccgcgcccgccgcccgaccgcgt
cgccgtgccacccgccgcgccgccgcgcccgccggatcaccggcagcggccgattccccg
gcggtcgccgagaccgtcgtacccgcggccgatgccgcagcacctgaggagagcgccgtc
gccgagaccgaggccgtccccgagacgcccgccgtgtccgaggacgacgccccgcgtcgt
ccgcgtcgccgtgccacccgccgggccaccgcgcccaccggggcgccggacgccgccgag
gccgccgagatcgtggtgcccgtcgccgaggagaccccggccgaggcgcccgccgtcgcg
gaagcacccgccgaggaggccgagcccgccgtgcgcggccgtcgtcgcgccacccgccgc
gcctccgcgccggccggggcgccgaagggcgccgagaagaccgagctgcccgagcagcag
gccgagccggacgccgtcaccgaggctcccgccgccgcggccgagcccgccgtcgaggac
gacgactccgcgccgcgccgtggtcgtcgtcgtgccacccgccgggtgaccgcgcccgcc
gagacgcccgccgtcgccgaggaggcccccgcggccgtcgccgtcgccgagaccccggtc
gccgaggtgcccgcgcccgccgacgccgaggacgccccgcgccgggcccgtcgccgctcc
gtgcgcaaggccgccaccggcttctccgcgcccgcccccgagaccgactccccgcggcgc
cccgcccggcccgcggtcgccgtgttccaggcgcccgtcttcaccgagccccggttccag
acgcccgagcgcgccgccgccgaggccgccgccggggtcgccgaacccgagggtcccgac
gacaccgaggccgccgaccaccgcgacgacaccgctgaggcgccccgcgaggccaccagg
gccgccaaggcgcccgccgccgacgaggagcagtccgccggttccaggcgccgcaggcgc
cgtcggggcgccgcctccgacgaggccgagacgcaggcccccgagcccgtcgtcgaggac
gagccggaggaggccgacgccgacgccgaggacggccacgacggcgacgacgactccgag
gacaccggttcgcgcaggcgccgccgcaggggcggccgccgtcgccgtcgcggcgactcc
gccgacgccggcggcgacgacgagtcggacgagcacgacgacacggacgagcacgccccg
cgcgacgactccgccgaggcgggcgacgccgagcaggccgacgacgccgatgacgacgcc
gactccgacgacgccgacgtccgttccggcgactcgggcggctccaactccagcagccgc
cgtcgccgcaggcgccgtcgccgggccggggacaacggcaccgacggcgagcccggtgac
aacgacccggagcgcaccgtcgtcaaggtgcgcgagccgcgcaagcagtccgagccgtcc
gacgaggtccagtccatcaagggctcgacccgtctggaggccaagaagcagcgccgcagg
gaaggccgagagcagggccgcaggcgcgtcccgatcatcaccgaggccgagttcctggcc
cgccgtgaggccgtcgagcgcgtgatggtggtccgccagcacggcgaccgcacccagatc
ggcgtcctggaggacggcgtgctcgtcgagcactacgtcaacaaggagcagtcgacctcg
tacgtcggcaacgtctacctgggcaaggtccagaacgtgctgccgtcgatggaggccgcc
ttcatcgacatcggcaaggggcgcaacgccgtcctgtacgccggtgaggtcaacttcgag
gcgctcggcatggccaacgggccgcgccgcatcgagtccgcgctgaagtccgggcagtcc
gtgctcgtgcaggtcaccaaggacccgatcgggcacaagggcgcgcgtctgaccagccag
gtctcgctgcccggccggtatctcgtgtacgtgcccgagggctcgatgaccggcatcagc
cgcaagctgcccgacaccgagcgggcccggctgaagaccatcctcaagaagatcgtcccc
gaggacgcgggcgtcatcgtgcgcaccgccgccgagggcgcgagcgaggacgagctgcgc
agggacgtcgaacggctccaggcgcagtgggaggagatccagaagaaggcgaagggcggc
aacgccccgacgctgctgtacggcgagcccgacatgacggtccgggtcgtccgcgacatc
ttcaacgaggacttcaccaaggtcgtcgtcagcggtgacgaggcctggtcgaccatccac
ggctatgtcgcgcacgtcgcccccgacctcgccgaccggctgtcgaagtggacctccgag
gtcgacgtcttcgccacgtaccggatcgacgagcagctcgccaaggcgctcgaccgcaag
gtctggctgcccagcggcggttcgctggtgatcgacaggaccgaggcgatgatcgtcgtc
gacgtcaacaccggcaagttcaccggccagggcggcaacctggaggagacggtcaccagg
aacaacctggaggcggccgaggagatcgtgcgccagctgcggctgcgcgacctcggcggc
atcatcgtcatcgacttcatcgacatggtcctggagtccaaccgggacctggtgctgcgc
cggctgctcgaatgcctcgggcgcgaccgcaccaagcaccaggtggcggaggtgacctcg
ctcgggctcgtgcagatgacccgcaagcgggtcgggcaggggctccttgagtccttctcc
gagacgtgcgtgcactgcaacggccggggcgtcatcgtccacatggagcagcccggttcc
gccggcggcggcggcaagcgcaagaagcgcggccggggcggcgacggtcacacccatgag
gccgcgcactccgtcgagtcggccgacggcctcgacgaggacaccgagtccgagagcgtc
gccgaggtggccgccgaggccgccgagccggtggcgctgcccggccccgagttcacgccc
gacgaggagctgtacagcagcgtcgccgaggcggaggccgcggcccgcggccgttcgcgg
cgccgcacgagccgccgggcgtccgcgccggccggcgcgccgagccgcagcgagcagcgt
gagcagcgggaacagcgcgacgagcgcgagcggcgcgacgagccgagggccgaggccccg
aaggccgaggcgccggtcgtcgagaccccggccgaggtggcgctcgccgagcccgccgcc
gtcgaggacgcggtcgtgcccgcccccgcccaggtcgaggcgcccgccgccgacgaggcc
gcgcccaagggccgcacccgccgtcgcgccacccgcaaggtgtccgcgcccgccgggtcg
cccgcgggtgccgaggccgccgtcgtgacggtcgctgaggccgctccggtggccgaggcc
cccgccgagcagcccgcgcagcccgtgcaggccgagcagcccgcggccgaggccgcgccc
gcccgtccgcggcgccgcgcggtgcgcaaggccaccgcgccgaccgcgtccggggaggcg
gccgtcgtggtcgtcccgtcggccgcgcccgaggcggtgacggaggccgccgaggcgccc
gccgaggcaccggctgaggctcccgagcccgcgcctgcgaagaagacggccgcgcgcaag
acggcggccaagaaggcgcccgccaagaaggccgccccggccaagaaggcggcggcgaag
aagacggtcgcgaagaaggccaccaccaagaaggcggcggccaagaagacgaccacggcg
aagacggcggcgaagaagacctcggtctccagcgccggcgacgaagcctga
DBGET
integrated database retrieval system
