KEGG   Streptomyces griseoviridis: ELQ87_27050
Entry
ELQ87_27050       CDS       T06660                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
sgd  Streptomyces griseoviridis
Pathway
sgd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sgd00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ELQ87_27050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgd03021]
    ELQ87_27050
Transcription machinery [BR:sgd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ELQ87_27050
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_28
Other DBs
NCBI-ProteinID: AZS87479
UniProt: A0A3S9ZIH8
LinkDB
Position
6034248..6035597
AA seq 449 aa
MPESSERDRTVPPGFPIPSVPLIAYGTDNGEAVDSAPEEPLPHPLAAIILEVAPVQTQTL
TQTDIGAAGAEPDDAESGVLVAVPPQHRAARHPEPGPAGPVEPAEHADSAASADTEAPAG
PPAVPEMATEPADEPPEPPRGRADTGGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEA
GLFAEERLGTTPGLDERLTLDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLD
LVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRV
VRVQRRMLQERGCEPTAEEVAAHLDLAPERVGEVLRLAQEPVSLHAPVGEEDDVALGDLI
EDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVT
RERIRQIESKTLNKLRDHALADQLRGYLD
NT seq 1350 nt   +upstreamnt  +downstreamnt
gtgcctgagtcctcggagcgcgaccgaaccgtcccacccgggttcccgatcccttcggtt
ccgctcatcgcgtacgggacggacaacggcgaggccgtcgactccgcccccgaagaaccg
ctgccgcaccccttggcagcgatcatcctggaggtcgcccccgtgcagacccagaccctc
acccagaccgacatcggcgcggccggcgcggagccggacgacgcggagagcggcgtcctc
gtcgcggtccccccgcagcaccgcgccgcgcgccacccggagcccggccccgccggcccg
gtcgaacccgccgagcacgctgactccgccgcatcagccgacaccgaggcccccgccggg
ccgcccgccgtgccggagatggccaccgagccggccgacgagccgcccgaacccccgcgc
ggccgcgccgacaccggcggcccgtcctctgacctgttccgccagtacctccgcgagatc
ggccgcatcccgctgctcaccgccgccgaggaggtcgaactcgcccgccgcgtcgaggcc
ggcctcttcgccgaggagcggctcggcaccacccccgggctcgacgagcggctcaccctc
gacctcgaccggctggtcgtgatgggccggatggccaaacgccggctgatcgaggcgaac
ctgcgcctggtggtctccgtcgccaagcggtacgtcggccgcggcctgaccatgctcgac
ctcgtccaggagggcaacctcggcctgatcagggcggtcgagaagttcgactacgcccgc
ggctacaagttctccacctacgcgacctggtggatcaggcaggccatgtcccgcgccctc
gccgaccaggcccgcaccatccgggtcccggtccatgtcgtcgaactcatcaaccgcgtc
gtccgcgtccagcgccggatgctccaggagcgcggctgcgagccgaccgccgaagaggta
gccgcccacctcgacctggcgcccgaacgggtcggcgaggtcctgcggctggcccaggag
ccggtgtcgctgcacgcgccggtcggcgaggaggacgacgtcgcgctcggcgacctcatc
gaggacggcgacgccgcctcgcccgtcgagtccgccgcgttcctgctgctgcgcgagcac
ctggaagccgtgctgtcgacactgggggagcgggagcgcaaggtcgtccagctccgctac
ggactcgccgacggccggccgcgcaccctggaggagatcggccgcatcttcggcgtgacc
cgcgagcggatacggcagatcgagtcgaagaccctcaacaaactccgcgaccacgccctc
gccgaccagctccgcggctacctggactga

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