Streptomyces griseoviridis: ELQ87_27050
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Entry
ELQ87_27050 CDS
T06660
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ELQ87_27050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgd03021
]
ELQ87_27050
Transcription machinery [BR:
sgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ELQ87_27050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AZS87479
UniProt:
A0A3S9ZIH8
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All DBs
Position
6034248..6035597
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AA seq
449 aa
AA seq
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MPESSERDRTVPPGFPIPSVPLIAYGTDNGEAVDSAPEEPLPHPLAAIILEVAPVQTQTL
TQTDIGAAGAEPDDAESGVLVAVPPQHRAARHPEPGPAGPVEPAEHADSAASADTEAPAG
PPAVPEMATEPADEPPEPPRGRADTGGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEA
GLFAEERLGTTPGLDERLTLDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLD
LVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRV
VRVQRRMLQERGCEPTAEEVAAHLDLAPERVGEVLRLAQEPVSLHAPVGEEDDVALGDLI
EDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVT
RERIRQIESKTLNKLRDHALADQLRGYLD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcctcggagcgcgaccgaaccgtcccacccgggttcccgatcccttcggtt
ccgctcatcgcgtacgggacggacaacggcgaggccgtcgactccgcccccgaagaaccg
ctgccgcaccccttggcagcgatcatcctggaggtcgcccccgtgcagacccagaccctc
acccagaccgacatcggcgcggccggcgcggagccggacgacgcggagagcggcgtcctc
gtcgcggtccccccgcagcaccgcgccgcgcgccacccggagcccggccccgccggcccg
gtcgaacccgccgagcacgctgactccgccgcatcagccgacaccgaggcccccgccggg
ccgcccgccgtgccggagatggccaccgagccggccgacgagccgcccgaacccccgcgc
ggccgcgccgacaccggcggcccgtcctctgacctgttccgccagtacctccgcgagatc
ggccgcatcccgctgctcaccgccgccgaggaggtcgaactcgcccgccgcgtcgaggcc
ggcctcttcgccgaggagcggctcggcaccacccccgggctcgacgagcggctcaccctc
gacctcgaccggctggtcgtgatgggccggatggccaaacgccggctgatcgaggcgaac
ctgcgcctggtggtctccgtcgccaagcggtacgtcggccgcggcctgaccatgctcgac
ctcgtccaggagggcaacctcggcctgatcagggcggtcgagaagttcgactacgcccgc
ggctacaagttctccacctacgcgacctggtggatcaggcaggccatgtcccgcgccctc
gccgaccaggcccgcaccatccgggtcccggtccatgtcgtcgaactcatcaaccgcgtc
gtccgcgtccagcgccggatgctccaggagcgcggctgcgagccgaccgccgaagaggta
gccgcccacctcgacctggcgcccgaacgggtcggcgaggtcctgcggctggcccaggag
ccggtgtcgctgcacgcgccggtcggcgaggaggacgacgtcgcgctcggcgacctcatc
gaggacggcgacgccgcctcgcccgtcgagtccgccgcgttcctgctgctgcgcgagcac
ctggaagccgtgctgtcgacactgggggagcgggagcgcaaggtcgtccagctccgctac
ggactcgccgacggccggccgcgcaccctggaggagatcggccgcatcttcggcgtgacc
cgcgagcggatacggcagatcgagtcgaagaccctcaacaaactccgcgaccacgccctc
gccgaccagctccgcggctacctggactga
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