Streptomyces griseoviridis: ELQ87_30130
Help
Entry
ELQ87_30130 CDS
T06660
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd00040
Pentose and glucuronate interconversions
sgd01100
Metabolic pathways
sgd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ELQ87_30130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ELQ87_30130
Enzymes [BR:
sgd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ELQ87_30130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AZS88013
UniProt:
A0A3S9ZK20
LinkDB
All DBs
Position
6712160..6713476
Genome browser
AA seq
438 aa
AA seq
DB search
MRTQICHGRVIGTVLGCTALVLAATGTAAAHPAHRVAPERQVLAAGDGWGSYSTGTTGGA
AADAAHVKTVTTWDGFKAALAAGGDAPKIIKVRGTIDADGPSCDSFAADGWDFDSYLATY
APEVWGRTSNLDAEPADSPEGLRRASAARQDAYIKAFVPANTTIIGVGPDAGFKGASLQI
KGVDNVIVRNLTFESPLDCFPQWDPTDTADGNWNSEYDSAVLYGATHVWMDHNTFTDGDH
PDSTLPHYYGRIFEQHDGELDIVKGSDHVTASWNVFADHDKTILIGNSDSASTAAVDRGH
LKVTLHHNLFSNLVERAPRVRFGQVDSYNNHFVAEEGFGYSYGIGLESQLVAQHNAFTLA
DGVKAGSILKKWSESSLTADDNWVNGVRTDLIAVHNAQIPAETLTAGAGWTPVLRTHVDR
PQAVPHLVDRGAGAGRLR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtacacagatatgtcatggacgcgtcattggtaccgttctgggctgcaccgccctc
gtcctggccgccaccggcaccgccgccgcgcaccccgcgcaccgggtggccccggagcgg
caggtgctcgccgcgggggacggctggggctcctactccaccggcaccaccggcggagcc
gccgccgacgcggcgcacgtcaagaccgtcaccacctgggacggtttcaaggcggcgctc
gccgcggggggcgacgcacccaagatcatcaaggtccgcggcaccatcgacgccgacggc
ccgagctgcgactccttcgcggccgacggctgggacttcgacagctacctggccacctac
gcccccgaggtctggggccgcaccagcaacctggacgccgagcccgccgacagccccgag
ggcctgcgcagggcctcggccgcccggcaggacgcctacatcaaggcgttcgtgccggcc
aacaccacgatcatcggggtcggccccgacgccgggttcaagggcgccagcctccagatc
aagggcgtcgacaacgtcatcgtccgcaacctgaccttcgagagccccctcgactgcttc
ccgcagtgggacccgaccgacaccgccgacggcaactggaactccgagtacgacagcgcg
gtcctctacggcgccacccacgtctggatggaccacaacaccttcaccgacggcgaccac
cccgacagcaccctgccccactactacggccggatcttcgagcagcacgacggcgaactc
gacatcgtcaagggctccgaccacgtcaccgcctcctggaacgtcttcgccgaccacgac
aagacgatcctgatcggcaacagcgacagcgcctccaccgccgccgtcgaccgggggcac
ctgaaggtcaccctgcaccacaacctcttctccaacctggtcgagcgcgccccccgggtc
cgcttcggtcaggtcgactcctacaacaaccacttcgtcgccgaggagggcttcggctac
agctacggcatcggcctggagtcccaactcgtcgcccagcacaacgcgttcaccctcgcc
gacggcgtcaaggccggctcgatcctgaagaagtggagcgagtcctcactgaccgccgac
gacaactgggtcaacggcgtgcggaccgacctgatcgccgtccacaacgcgcagatcccc
gccgagaccctcacggcgggcgccggctggacacccgtcctgcgcacccacgtcgaccgg
ccgcaggccgtcccgcacctcgtcgaccggggcgcgggcgcgggccggctgcgctga
DBGET
integrated database retrieval system