Streptomyces griseoviridis: ELQ87_30430
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Entry
ELQ87_30430 CDS
T06660
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03030
DNA replication
sgd03430
Mismatch repair
sgd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELQ87_30430
03430 Mismatch repair
ELQ87_30430
03440 Homologous recombination
ELQ87_30430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgd03032
]
ELQ87_30430
03400 DNA repair and recombination proteins [BR:
sgd03400
]
ELQ87_30430
Enzymes [BR:
sgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ELQ87_30430
DNA replication proteins [BR:
sgd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ELQ87_30430
DNA repair and recombination proteins [BR:
sgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ELQ87_30430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
RNase_H_2
HisKA_3
Motif
Other DBs
NCBI-ProteinID:
AZS88071
UniProt:
A0A3Q9KZC8
LinkDB
All DBs
Position
complement(6775440..6776444)
Genome browser
AA seq
334 aa
AA seq
DB search
MLEDLTTAASAPVPWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTT
VNPQRDPGPVWIHGLTSDVLADAPLFEEVAEEFAARLADRVLVAHNAVFDWQMIAREYAR
ARAEAPVRQRLCTIALAKELALPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPS
LRAAAAGGVRLPLHECRPLTEWADRPAPQIGRQAGPGQAGGYGSYRPSSWRPARKRPVCP
HPNPGRYEDGKPLKQGMRVAFSGDTSVERELLEDRAAEAGLHVATSLSRLTSLLVTNDPD
SGTSKVVKARQFGTPVVDEAAFGQLLRDVAPADE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacctcacgaccgcagcgtccgcccccgttccgtggccggccgcgtatccg
cagggatacgcggtcgtcgacgtcgagaccacgggcctggcccgcgacgaccggatcatc
tcggcggcggtctaccggctcgacgcgcgcggtgaggtcgaggaccactggtacacgacg
gtcaacccgcagcgcgatcccgggccggtgtggatccacggtctgaccagtgacgtgctg
gcggacgcgcccctcttcgaggaggtcgccgaggagttcgcggcccggctcgcggaccgg
gtgctggtcgcgcacaacgcggtcttcgactggcagatgatcgcccgggagtacgcgcgg
gcgcgcgccgaggcccccgtgcggcagcggctgtgcaccatcgcgctcgccaaggagctg
gcgctgccgctgcccaaccacaaactggagtcgctggccgcgcacttcggggtggtccag
cagcgcgcgcaccacgcgctggacgacgcgcgcgtgctggcggaggcgttccggccgagc
ctgcgcgcggcggcggcgggcggggtcaggctgccgctgcacgagtgccggccgctgacg
gagtgggcggaccggccggcgccgcagatcggccggcaggcgggcccggggcaggcgggc
ggctacgggagctaccggccgtcgagttggcggcccgcgcgcaagaggccggtgtgcccg
catcccaacccgggccgctacgaggacggcaaaccgctcaaacagggcatgcgggtggcg
ttctcgggggacacctcggtcgagcgtgagctgctggaggaccgcgcggccgaggccggt
ctgcatgtggcgacgagcctgtcccggctgaccagcctgctggtgacgaacgacccggac
tccggcacctcgaaggtcgtcaaggcccgccagttcggcaccccggtggtcgacgaggcg
gccttcgggcagctgctgagggacgtggccccggccgacgagtga
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