Streptomyces griseoviridis: ELQ87_36185
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Entry
ELQ87_36185 CDS
T06660
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELQ87_36185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgd03021
]
ELQ87_36185
03019 Messenger RNA biogenesis [BR:
sgd03019
]
ELQ87_36185
Transcription machinery [BR:
sgd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ELQ87_36185
Messenger RNA biogenesis [BR:
sgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ELQ87_36185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
DUF3086
NACHT
Spore_III_AA
AAA
ATPase_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZS89077
UniProt:
A0A3Q9KZ95
LinkDB
All DBs
Position
complement(8241192..8242334)
Genome browser
AA seq
380 aa
AA seq
DB search
MTTTLEPPQLKQETSAQTVTGVLDIDPAGKGHLRASDLQPTPADLPVSPALIRRHGLLKG
DLVEGVRGDRRTLTDVVRVNGRTPADLRTRRHFRDLTPLHPQERLRLEHPGAGLTGRVTD
LIAPIGKGQRGLIVAPPKTGKTVLLQQIAAAVAGNHPECRLMVVLLDERPEEVTEMRRSV
RGEVYASTFDRAPKQHIALAELVIERAKRLVEAGEDVVILLDSLTRLCRAHNNAAASGGR
TLSGGVDATALIGPKRFFGAARLAEEGGSLTILATALVETGSRADDFYFEELKSTGNMEL
RLSRDLASRRVFPAVDITPSGTRREELLLSPAESTAVRGLRRALQTREGQAGVETLLERL
RATPDNATFLRRVQPTLPAD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacactcgaaccccctcagctgaagcaggaaaccagcgcccagacggtcacc
ggtgtcctggacatcgacccggcgggcaagggccacctgcgggcgagtgacctccagccc
acccccgccgacctgcccgtctcccccgcgctgatccgtcgtcacggactgctcaagggc
gacctcgtcgagggcgtacgcggcgaccggcgcaccctgaccgacgtcgtccgcgtcaac
ggacgcacgcccgccgacctgcggacccgccgtcacttccgtgacctcacaccgctgcac
ccccaggagcggctgcgcctcgaacacccaggagccggactgaccggccgcgtcaccgac
ctgatcgcgccgatcggcaagggccagcgcgggctgatcgtcgccccgcccaagaccggc
aagaccgtgcttctccagcagatcgccgcggccgtcgcgggcaaccaccccgagtgccgg
ctgatggtcgtgctcctcgacgaacgccccgaggaggtcaccgagatgcggcgctcggtg
cgcggcgaggtgtacgcctcgaccttcgaccgggcgcccaagcagcacatcgccctcgcc
gagctggtcatcgagcgggccaagcggctcgtcgaggccggcgaggacgtcgtcatcctg
ctcgactccctgacccggctgtgccgggcccacaacaacgcggcggcctccggtggccgc
accctcagcggcggtgtcgacgcgacggcgctgatcgggcccaagcggttcttcggagcc
gcgcgtctcgccgaggagggcggctccctcacgatcctcgccaccgcgctggtggagacc
ggctcccgcgctgacgacttctacttcgaggagctgaagagcacgggcaacatggagctg
cggctcagccgcgacctggcctcccgccgggtcttccccgccgtcgacatcactccgtcc
ggcacccgccgcgaggaactcctgctctccccggccgagtcgacggccgtgcgcggactg
cgccgtgccctgcagacccgcgaggggcaggccggcgtcgagaccctgctcgaacggctg
cgggcgaccccggacaacgcgaccttcctgcgccgcgtccagcccaccctgcccgccgac
tga
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