Streptomyces griseorubiginosus: DWG14_01598
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Entry
DWG14_01598 CDS
T06099
Symbol
dbpA_1
Name
(GenBank) ATP-dependent RNA helicase DbpA
Organism
sge
Streptomyces griseorubiginosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYC37381
UniProt:
A0AAI8KWU7
LinkDB
All DBs
Position
1823188..1829946
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AA seq
2252 aa
AA seq
DB search
MLPSLAAEDLRRALAAYLTTSFALADDDVREELEAFLERPESRLFRGPYLRVRTPFRYAP
PGWEKALDWSPSLRPYTHQANAWQRLSSKSGHAPEPTIVTTGTGSGKTESFLIPILDHCA
RARAAGVKGVKALLLYPMNALADDQARRIDDLLAKNAALSSVTAGIYIGGASGNRPPDDE
DENAPGSYARESGASTITPAQLSPNSRLITDREAIRANPPDLLLTNYKMLDLLLQRIPDV
PLWQDGGLTYVVLDEFHTYDGAQGTDVAMLLRRLGAATGKAEPGRPLGTITPVATSATLG
GGTGGAGATNGTGAVGRTPATSGTPSAEAAPTLDGPQKSDRELLLEFAEKVFGTPFPDAA
LIGEDRQSPGDFVAEPDFLLPVPSPAALAAVPDPLDDPAALHRLAELVVGMDFADPIQLG
EKLRQHNLIRALLDVAGDTPVTVPEIAREFAKRGGGAAWDEAARTDIDLVATGLARLLAL
VSTARTYDPIADRTIPFLRVEAQLWVREVRRVIRAATPTPHFRWFDDDGPTGDTRPNPAN
LAVYPSAEVDSTADADTDPDAPGDGASALTPDSPVPFVRPVGPAYRAHLPAVYCRHCGRS
GWAALSTDLEWQQLKTKPLEIYRASAQGNRAVRWMIRARPGEHTPVFLHAEEAELRTVPS
NDTVPVITVAGPIPANAGDKCPSCDLTDGMRFLGAGTATLASVTTTQLFSDRGLTDDERK
LLVFTDSVQDATHRAAFIANRSFGFTFRGLLAEQLTPGAPVAVHDLATDAAEAVVTAAEK
GEMSKLASIVPPDLRDNPEIRTLLSGDGFSDAGAYMLQDRMVFQTLLEFGLRSRLGRTLE
LTRTAAAEVHLPDAATVAALLREAHQRLPGQITLPTDDADYVVYLRGLLERMRLRGALFH
PWLKEYIAQAGARRWPIWGGRPTGMPAFPRGLAAPTFPVLGRLGTSEFDSLARDNTWFAD
WGHRTLGCERREARALAEQAMKLLAQREVLATYPAEGGSTVFALRPRTIMVHSLATGPSS
PDDGSGAGGAGADGTGVNDHGVRCDSCTWRQTVPPGRREDWLGTPCLRFQCGGTFTTDDR
DYSDDYYRRLYTVDRPGDVLTAEHTGALSRARREEVEQAFKNRPSPFAPNVLTCTPTLEL
GIDIGDLSAVLLASLPPAPANYAQRIGRAGRSTGNSLTVTFVPRGARNQYYLHAPEQMLA
GRIIPPDCYLDASEILRRQYLAYLLDRAADRSLWRGTMMPEEPMPHRIGALFTRGLAEDG
WFRRFLDVAHARHAELASSFVQLFPGMSAEAEQGLRQFAQLELEQTVGQAATAWRKRLEA
LRSRSRQIGRAFDALSTASGDRERDEQRRQLYAERRSVNRRRDALVGENSVNAMVRLGLL
PNYTLHDDATLLDATLWWKDADGEFQDQLTEYGRGSRMGLLELAPGNTFHTDGYKYIVNG
LDLGVGEGDTAYAKWRLCPECGYVATAEAGLDLTACPRCLTPQIADPGALHTVLVPERVT
ARERREDARLTDERDERERRRFNDVTLVDIDPDQPQGLRAWKRVGELPFGVEFARVATIR
TLNLGPAAAAGPEHQIAGDDVQVPGFETCLECGAVRGVHPQAWDRAAQRIGTRHAYWCSH
KDDGIDAETASMQRLVLAHELTTQALRILLPVSTMELQTRLVSFKAALLLGITKHFGGAP
DHLRVVPATMPGGTRELRRRFLVLHDSMPGGTGYLEHLADATVLHRVLTLAQTALRDCPC
GKENLRTPCHRCLLPHVSSNEHPFASLRVARELLDEILTGWDTEQVDTLSGVRIDQLAES
ELEKQFVRTLVDWGSRRPESGSVTPRAGERGMEYELRFTRPDGSGTRWLFQDHVRQLTSA
PSEPDYLLTRIDGPSTRIAVFLDGYAFHASTGINRIADDAAKREALRAEGMQVWQFTHAD
VMAWKAAVEGTADDREVRTPAEPLLGEGALRTARQIHQMLTGGPRPDDTLEPALRNPIET
LLAVLADPDAEKWSRRATALISGFAGGGAARQPIDRRSVGERLPDVLAGGSLPVAGNPAA
ADAIAMDVRTLGGLRVIGLLDRRAEPATGQPGMSAWSAFTVLDDRDEAVAEPGHRARWAD
WLRWSNLLQLLTGDRGSALPRSFHQVAMSTAGQLDPHTVALLAGALPTTTGLPDELPEPW
AEAVEWASSQAEELLFALCREARTRHFGAPEVGFELDDRVAQQAELAWPDARVAVFLDAD
EHRDAAFAEAGWHVVHAGTVDVAELAERLENV
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgcttccctccctggccgccgaggatctgcgccgtgccctcgccgcgtacctgacgacg
agcttcgcgctcgccgacgacgacgtccgcgaggagctcgaggcgttccttgagcggccg
gagagtcggctcttccggggcccgtacctccgtgtccgcacgcccttccggtacgcgccc
cccggctgggagaaggcccttgactggtcgcccagcctccgcccctacacccaccaggcg
aacgcctggcagcggctgtccagcaagtccggccacgcccccgagccgacgatcgtcacc
accggcaccggctccggaaagaccgagtccttcctcattccgatcctcgaccactgcgcc
cgtgcccgcgccgccggggtgaagggtgtcaaggcgctgctgctctacccgatgaacgcg
ctggccgacgaccaggcccgccgtatcgacgaccttctcgccaagaacgccgccctctcc
tccgtcaccgccggcatctacatcggcggcgcctccggcaaccgccccccggacgacgag
gacgagaacgcccccggctcctacgcccgcgagtccggcgcaagcaccatcacccccgcc
cagctgtcccccaacagccgcctgatcaccgaccgcgaggccatccgcgcgaacccgccg
gacctgctgctcaccaactacaagatgctggacctcctcctccagcgcatcccggacgtc
ccgctctggcaggacggcgggctgacgtacgtcgtcctggacgagttccacacctacgac
ggcgcccagggcaccgatgtggcgatgctgctgcgccgcctgggcgcggccaccggcaag
gccgagccgggccgccccctcggcacgatcacccccgtcgccacctccgccaccctcggc
ggcggaaccggcggagcgggcgcaaccaatggaaccggcgccgtcggccgcaccccagcc
accagcggcaccccctccgccgaagcggcccccaccctcgacggcccccagaagtccgac
cgcgaactcctcctcgaattcgccgagaaggtcttcggtacccccttcccggacgccgcc
ctcatcggcgaggaccgccagtcgccgggcgatttcgtcgccgagcccgacttcctcctc
ccggtgccctccccggccgccctcgccgccgtccccgaccccctcgacgacccggccgcc
ctccaccggcttgccgaactcgtcgtcggcatggacttcgccgacccgatccaactcggc
gagaagctccgccagcacaacctgatccgcgccctcctcgacgtcgcgggcgacactccc
gtcaccgtccccgagatcgcccgcgagttcgcgaagcgcggcggcggcgcggcctgggac
gaggcggcccggaccgacatcgacctggtcgcgaccggcctcgcccgtctcctcgcgctg
gtctcgaccgcccgtacctacgacccgatcgccgaccgcaccatccccttcctccgcgtc
gaggcccagctctgggtccgtgaggtgcgccgcgtgatccgcgccgcgacgccgacgccg
cacttccgctggttcgacgacgacggccccaccggggacacccgccccaacccggccaac
ctcgccgtctacccctctgccgaggtggacagcaccgccgacgccgacacggacccggat
gctccgggcgacggcgcctccgccctcaccccggacagccccgtcccgttcgtccgcccc
gtcggcccggcctaccgcgcccaccttcccgccgtgtactgccgtcactgcggacgctcc
ggctgggccgcgctctccacggatctggagtggcagcagctcaagaccaagccgttggag
atctaccgggcctctgcccagggcaaccgggccgtgcgctggatgatccgcgccaggccc
ggcgagcacaccccggtcttcctccacgccgaggaagccgaactgcgcacggtgccgagc
aacgacaccgtgcccgtcatcaccgtcgccgggcccatccccgccaacgcgggcgacaag
tgcccctcctgcgacctgaccgacggcatgcgcttcctcggtgcgggcaccgccaccctc
gcctccgtcaccaccacccagctcttctccgaccgcggcctgaccgacgacgagcgcaag
ctgctggtcttcaccgactccgtccaggacgccacccaccgggccgcgttcatcgccaac
cgcagcttcggcttcaccttccgcgggctgctcgccgagcagctcacgccgggcgccccc
gtcgccgtacacgatctggccaccgatgccgccgaagccgtggtgacggcggcggagaag
ggcgagatgagcaagctcgcctcgatcgtgccgcccgacctgcgcgacaacccggagatc
cggacgctcctcagcggtgacgggttcagcgacgcgggcgcgtacatgctgcaggaccgc
atggtcttccagacactgctggagttcggcctgcgctcacgcctgggccgtaccctcgaa
ctgacccggaccgccgccgccgaggtgcacctccccgacgccgccaccgtcgcggctctg
ctgcgggaagcccaccagcgcctcccggggcagatcacccttcccaccgacgacgccgac
tacgtcgtctacctgcgcggcctgctggagcgcatgcgcctgcgcggggcgctgttccac
ccctggctcaaggagtacatcgcccaggccggcgcccggcgctggccgatctggggcggg
cggcccacgggcatgcccgcgttcccgcgcggtctggccgcaccgacgttcccggtcctc
gggcgcctcggcacatccgagttcgactcgctggcccgcgacaacacctggttcgccgac
tgggggcaccgcaccctcggctgcgagcgacgtgaggcccgcgccctcgccgaacaggcc
atgaagctgctcgcgcagcgtgaggtactggcgacctacccggccgagggcggctcgacc
gtcttcgccctcaggccgcgcaccatcatggtgcacagcctcgccaccggcccgtcgtcc
cctgacgacggcagcggggcgggcggggccggggccgacggaacgggcgtcaacgaccac
ggcgtccgctgcgacagctgcacctggcggcagaccgtcccgcccggccggcgcgaggac
tggctcggcacgccctgcctgcgcttccagtgcggcggcaccttcaccaccgacgaccgc
gactacagcgacgactactaccgccgtctctacacggtcgaccggcccggtgacgtcctc
accgccgaacacacgggcgcactcagccgggcccgccgcgaggaagtcgagcaggcgttc
aagaaccgtccctcgcccttcgccccgaacgtactgacctgcacgcccaccctggaactc
ggcatcgacatcggcgacctgtccgccgtactgctcgcctccctgccgcccgcgcccgcc
aactacgcgcagcgcatcggccgcgccggccgcagcaccggcaactcgctcaccgtcacc
ttcgtaccgcgcggcgcccgcaaccagtactacctgcacgcacccgagcagatgctcgcg
ggccggatcatcccgccggactgctacctcgacgcctccgagatcctgcgccgccagtac
ctggcgtacctgctggaccgggccgccgaccgcagcctgtggcgggggacgatgatgccc
gaggagcccatgccgcaccgcatcggcgccctcttcacccgagggctcgccgaggacggc
tggttccgccgcttcctggacgtcgcccacgcccgccacgccgaactcgcgtcctctttc
gtccagctcttccccggcatgtcggccgaggccgagcagggcctgcggcagttcgctcag
ctggagctggagcagaccgtcggccaggccgccaccgcgtggcgcaaacgcctggaggct
ctgcgctcccggtcccggcagatcggccgggccttcgacgccctgtccaccgcctccggg
gaccgcgaacgcgacgagcagcgccgccagctctacgccgagcgcaggtcggtcaaccgg
cgcagggacgccctggtcggcgagaactcggtcaacgccatggtccgtctgggcctgctg
cccaactacaccctccacgacgacgccacgctgctcgacgcgacgctgtggtggaaggac
gccgacggcgagttccaggaccagttgaccgagtacgggcggggctcacgcatgggcctg
ctggaactcgcacccggcaacaccttccacaccgacggctacaagtacatcgtcaacggc
ctggacctgggcgtcggcgagggcgacaccgcctacgccaagtggcggctgtgccccgag
tgcggctacgtcgccaccgcggaggcaggcctggacctcacggcctgcccgcgctgcctg
acgccacagatcgccgatcccggcgcgctccacaccgtgctcgtgcccgaacgggtgacc
gcccgcgagcggcgcgaggacgcacggctcaccgatgagcgcgacgagcgggagcggcgc
cggttcaacgacgtcacgctggtggacatcgacccggaccagccccagggactgcgcgcc
tggaagcgggtgggagagctgccgttcggcgtggagttcgcccgggtggcgaccatccgc
accctcaacctcggcccggccgccgccgcgggtcccgagcatcagatcgccggcgacgac
gtccaggtgcccggcttcgagacctgcctggagtgcggggccgtacgcggcgtgcacccc
caggcttgggaccgggccgcccagcggatcggtacccgtcacgcgtactggtgcagccac
aaggacgacgggatcgacgccgagacggcgtcgatgcagcgactcgtcctcgcacacgag
ctgaccacgcaggcactgcggatcctgctgcccgtctccacgatggaactgcagacccgg
ctggtgtcgttcaaggccgcgctgctgctgggcatcaccaagcacttcggcggcgctccc
gaccatctgcgcgtcgtacccgcgaccatgccgggcggcacccgggaactgcgtcgccgc
ttcctggtgctgcacgactccatgcccggcggcaccggctacctggagcacctcgccgac
gcgaccgtgctgcaccgggtgctgaccctcgcccagaccgccctgcgggactgcccctgc
ggcaaggagaacctgcgcaccccctgccaccgctgcctgctgccgcacgtcagcagcaac
gaacaccccttcgcgtcgctgcgggtcgccagggagctcctggacgagatcctcacgggc
tgggacacggaacaggtcgacaccctgtccggagtgcgtatcgaccagctcgccgagagc
gagctggagaagcagttcgtccgcaccctcgtcgactggggcagccgccgcccggagtcc
ggctcggtgacgccccgcgccggggaacgcggcatggagtacgagctgcgtttcacccgc
ccggacggcagcggcacccgctggctcttccaggaccatgtgcggcagctgacgtccgcg
cccagtgaacccgactatctactgacccggatcgacgggccgtcgacacgcatcgcggtc
ttcctcgacggctacgccttccacgccagcaccggcatcaaccggatcgccgacgacgcc
gccaagcgcgaggcgctgcgggccgaaggcatgcaggtgtggcagttcacgcacgcggac
gtgatggcctggaaggcggcggtggaggggaccgcggacgaccgcgaggtgcgcaccccc
gccgaaccgctcctcggtgagggcgcgctgcggaccgcccggcagatccaccagatgctg
acgggcggcccacgccccgacgacaccctggagccggcactgcgcaacccgatcgagacg
ctgctcgcggtgctggccgatcccgacgccgagaagtggtcccgcagggcgacggcgctg
atcagcggtttcgccgggggcggagcggcgcggcagccgatcgaccggcgttcggtgggc
gagcggctgccggacgtgctcgcgggcggctccctgccggtcgccggcaacccggccgcc
gccgacgccatcgcgatggacgtccgcaccctgggcgggctgcgcgtcatcgggctgctc
gaccggcgggccgagcccgcgaccgggcagcccgggatgtccgcctggtcggccttcacc
gtgctggacgaccgcgacgaggcggtcgccgagccgggtcatcgggcgcggtgggccgac
tggctgcggtggtccaatctgctgcagctgctgaccggtgaccggggttcggcactgccg
cgttcgttccaccaggtcgcgatgtccacggccgggcagctcgacccgcacacggtcgcc
ctcctcgcgggtgcgctgcccaccaccacgggcctgcccgacgaactgccggagccctgg
gcggaggcggtcgagtgggcctcgtcgcaggccgaggaactgctgttcgccctgtgccgg
gaagcccgcacccgtcacttcggcgcccccgaggtcggcttcgagctcgacgaccgggtc
gcgcagcaggcggaactcgcctggccggacgccagggtggcggtgttcctcgacgcggac
gagcaccgtgacgccgcgttcgcggaggccggctggcacgtcgtacacgccgggacagtt
gatgtggccgagttggccgagcgtttggagaatgtgtga
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