Streptomyces griseorubiginosus: DWG14_01755
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Entry
DWG14_01755 CDS
T06099
Symbol
alkA_1
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWG14_01755 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sge03000
]
DWG14_01755 (alkA_1)
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_01755 (alkA_1)
Enzymes [BR:
sge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DWG14_01755 (alkA_1)
Transcription factors [BR:
sge03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DWG14_01755 (alkA_1)
DNA repair and recombination proteins [BR:
sge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DWG14_01755 (alkA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AYC37537
UniProt:
A0AAI8PM26
LinkDB
All DBs
Position
complement(2003722..2005242)
Genome browser
AA seq
506 aa
AA seq
DB search
MQTGMYTETERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFHPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQ
IERQLLAELGAGPLALARAQRAQTARILIETTPLPMADVAFAAGFSAIRTFNDTVREVFA
LSPSELRDRVRGRGATTAAADPVPRGAGPGTPGVLNLRLPFRAPLNPDNLFGHLAATAVP
GVEEWRDGAYRRTLRLPYGHGVVALTPRPDHIACRLRLSDLRDLTVAISRCRRMLDLDAD
PVAIDDQLRTDPLLAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAGRLVTA
HGEPLDDPEGGLTHLFPTPEALAALDPACLAMPHTRRTTFTTLVQQLADGTLQLGVESDW
SDTRARLLALPGFGPWTVDVIAMRALGDPDAFLPTDLGIRRAAQELGLPSTPAALTARAA
AWRPWRAYAVQYLWATDSHPINFLPV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggggatgtacaccgagaccgagcgctgtgtgcgcgccgtgcagtccaaggac
gcacggttcgacggctggttcttcacggctgttctgacgacccgcatctactgccggccg
agctgtccggtcgtcccgcccaagcccgagaacatgacgttccacccgagcgcggcggcc
tgccagcaggcgggtttccgggcctgcaagcggtgccggcccgacaccagcccgggctcg
cccgagtggaaccagcgggccgacctggtggcccgcgcgatgcggctcatcgccgacggg
gtggtcgaccgcgagggcgtgccgggcctcgccgcccggctcggctacagcacccggcag
atcgaacgccagctgctcgccgaactcggcgcgggcccgctcgccctcgcccgcgcccag
cgggcccagacggcgaggatcctcatcgagaccaccccgctcccgatggcggacgtcgcc
ttcgcggccggcttctccgcgatccgcaccttcaacgacaccgtgcgcgaggtcttcgcg
ctctccccgagcgagctgcgcgaccgggtacgggggaggggagcgacgaccgcggcggcg
gacccggtgccgcggggagccggccccggcacacccggggtgctgaacctgcggctgccg
ttccgcgcccccctcaaccccgacaacctcttcggccacctcgcggccaccgccgtcccg
ggcgtggaggagtggcgggacggcgcctaccgacgcacgctgcggctgccgtacggacac
ggtgtcgtggccctcaccccgcggcccgaccacatcgcctgccggttgcggttgagtgac
ctgcgggacctgaccgtcgccatcagccgctgccgccggatgctcgacctggacgccgat
ccggtcgcgatcgacgaccagctgcgcacggacccgctgctggccccgctggtggacaag
gcgcccggcagacgtgtcccgcgcacggtggacgaggcggagttcgccgtgcgggccgtg
ctggggcagcaggtctccacggcggcggcccgcacccacgcgggccgtctggtcaccgcc
cacggcgagccgttggacgacccggagggcggcctcacccacctcttccccacacctgag
gcgctggccgcgctggacccggcctgcctggcgatgccccatactcgccggaccaccttc
accaccctggtgcagcaactggcggacggcacgcttcagttgggcgtcgagtccgattgg
tcggacacccgggcccggctgctcgcgctgcccggcttcggcccctggacggtcgacgtc
atcgccatgcgcgccctcggcgacccggacgccttcctcccgaccgacctcggaatccgc
cgtgccgcccaggagttgggcctgccctccaccccggccgcgctgacggcccgcgccgcg
gcctggcggccctggcgggcgtacgcggtccagtacctgtgggcgaccgacagccacccg
atcaacttccttcccgtgtga
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