Streptomyces griseorubiginosus: DWG14_01910
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Entry
DWG14_01910 CDS
T06099
Symbol
alkA_2
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWG14_01910 (alkA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sge03000
]
DWG14_01910 (alkA_2)
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_01910 (alkA_2)
Enzymes [BR:
sge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DWG14_01910 (alkA_2)
Transcription factors [BR:
sge03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DWG14_01910 (alkA_2)
DNA repair and recombination proteins [BR:
sge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DWG14_01910 (alkA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AYC37692
UniProt:
A0AAI8KXK7
LinkDB
All DBs
Position
complement(2188698..2190083)
Genome browser
AA seq
461 aa
AA seq
DB search
MDEDTRYEAVRSRDARFDGEFFFAVRTTGIYCRPSCPAVTPKRHNVRFYPTAAAAQGSGF
RACRRCRPDAVPGSADWNVRADVVGRAMRLIGDGVVDREGVAGLAGRLGYSPRQVQRQLT
AELGAGPVALARAQRAHTARVLLQTTALPVTEIAFASGFASVRQFNDTVREIYAATPTGL
RAAARTARRPATPTAGIPLRLAHRGPYQSAAVFDLLESEAVHGVEEVTGAPGRRTYRRTL
RLPHGTGIVAVLERPGTVRAPSGAHPGGWLDAHLHLTDPRDLTTAVGRLRRLFDLDADPY
AVDERLAEDPRLAPLVAARPGLRSPGAADPEELAVRALVGRTASERLVQRHGKTLDAPCG
SLTHLFPEPAALTGATGPLGALATALADGAVRLDPGADRDEAQHALLALPGLDARTVATV
RTRALGDPDVAPPGLDTPDSWRPWRSYAWQHLRTAGELETS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacaccaggtacgaagccgtccgcagcagggacgcccggttcgacggggag
ttcttcttcgctgtccggacgaccgggatctactgccgccccagctgccccgcggtgacc
ccgaagcgtcacaacgtccgcttctacccgacggccgccgccgcgcagggctccggattc
cgggcctgccggcggtgccgtccggacgcggtgcccggctccgccgactggaacgtccgc
gccgacgtcgtgggccgggcgatgcgcctgatcggcgacggagtcgtcgaccgggagggc
gtcgccgggctcgccggccgcctcggctacagcccacggcaggtccagcggcagctcacc
gccgagctaggcgccggacccgtcgccctggcccgcgcccagcgggcccacacggcccgc
gtcctgctccagaccaccgccctgccggtcaccgagatcgcgttcgcgtcgggcttcgcc
agcgtgcggcagttcaacgacaccgtccgcgagatctacgccgccacccccaccggcctc
agggccgccgccaggaccgcccgccgtcccgccacccccaccgcgggcattccgctacgg
ctcgcccaccgcggcccctaccagtccgccgccgtcttcgacctgctggagagcgaggcc
gtccacggcgtcgaggaggtgaccggagcaccgggccggcgcacctaccgccgcacgctc
cgcctcccgcacggcaccgggatcgtcgccgtcctcgaacggcccggcacggtcagggcc
ccctccggcgcccaccccggcggctggctcgacgcccacctgcacctgaccgacccccgc
gacctgaccaccgccgtcggacggctgcggcgcctgttcgacctcgacgccgacccctac
gccgtcgacgagcgcctggccgaggacccgcggctcgccccgctggtcgccgcccgcccc
ggactccgctcgcccggcgccgccgaccccgaggagctcgcggtacgggcactggtgggc
cgcaccgcatccgaacggctcgtccagcgccacggcaagaccctggacgccccctgcggg
agcctcacccacctcttccccgagcccgccgccctcacgggggcgaccggaccgctgggc
gcgctcgcgaccgccctggccgacggcgccgtacggctggacccgggcgccgaccgcgac
gaggcgcagcacgcgctgctcgccctgcccggcctggacgcccgtaccgtcgccaccgtc
cgcacccgtgcgctcggcgaccccgacgtcgccccacccggcctcgacacccccgacagc
tggcgcccctggcgctcctacgcctggcaacacctgcgcacagcaggagagttggagaca
tcatga
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