Streptomyces griseorubiginosus: DWG14_01938
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Entry
DWG14_01938 CDS
T06099
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sge
Streptomyces griseorubiginosus
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DWG14_01938
Enzymes [BR:
sge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
DWG14_01938
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF4397
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
AYC37720
UniProt:
A0AAI8KXX9
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All DBs
Position
2224611..2226293
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AA seq
560 aa
AA seq
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MSEPTVNRAVGRRTFVLGTAAAAGTAALAGPLAQAASAASFGYRDDGSNYVVDTGASLVF
KVSKTNGDLTSLVYKGTEYQGYGGKNSHIESGLGTSTVTVKQSGSTILISVAYGTLRHYY
AARSGENNVYLWTNRADTSVASTRFILRVKAGLFLNDQPDSYTYAPTTIEASDVFAKSDG
QTRSKHYSKLRVLDYDYIGWSAGGVGLWIVRSNHEKASGGPFYRSLLRHQSADGGGLYEI
LHYAQNQTEDERFGLQGPYVIALTDGGAPSSSLFPGALTTPWADSLGISGYVASGGRGRV
AGVGITGRNTAYPYTVGLANAAAQYWGSARSSDGYFSIAGVLPGTYTLTVFKSELAVHTT
SVTVTAGGTTTLNSIAIPSSNDPSNASAIWRINDWTGTPSGFKNADLMTYAHPSDVRAAA
WTGNVVIGSGTETSAFPCYLWKDVNSGLLVYFKLTAAQAAAAHTLRIGVTTAYANGRPQV
VVNDTWTSAIPSPPTQPSTRSLTNGSYRGNNHTFTYSVPASAWRTDTGQYNTLKINIVSG
SGTTAYLSAGTSIDALDLLT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaccgtgaacagagcggtcggacgccgtaccttcgtcctcggcaccgcg
gccgccgccggcaccgcagccctcgccgggccgctcgcccaggccgcgtccgcagcgagt
ttcggctaccgcgacgacggctcgaactacgtcgtcgacaccggcgcgagcctcgtcttc
aaggtcagcaagaccaacggcgacctgacctcgctggtctacaagggcaccgagtaccag
ggctacggcggcaagaactcgcacatcgagtcgggactcggcacgtcgacggtcaccgtc
aagcagtccgggtcgacgatcctgatctcggtcgcgtacggcacgctgcggcactactac
gcggcccgcagcggcgagaacaacgtctacctgtggaccaaccgggccgacacctcggtc
gcctcgacccgcttcatcctgcgcgtgaaggccggcctgttcctcaacgaccagcccgat
tcctacacttacgcgcccaccaccatcgaggcctcggacgtgttcgccaagtccgacggc
cagacccgctccaagcactactcgaagctgcgggtcctcgactacgactacatcggctgg
agcgcgggcggcgtcggcctgtggatcgtgcgctccaaccacgagaaggcgtccggcggc
cccttctaccgctcgctgctgcgccaccagagcgcggacggcggtggcctgtacgagatc
ctgcactacgcccagaaccagaccgaggacgagcgcttcggcctccagggcccgtacgtc
atcgccctcacggacggcggcgcgccctcctcgtccctcttccccggcgccctcaccacc
ccgtgggcggactcgctcggcatctccggatacgtcgcctcgggcggccggggccgggtc
gccggcgtcggcatcacaggccggaacaccgcgtacccgtacaccgtcgggctcgccaac
gcggcggcccagtactggggttcggcccgctcgtcggacggatacttctccatcgccggc
gtcctcccggggacgtacacgctgaccgtcttcaagagcgaactcgccgtccacaccacg
tcggtgaccgtgaccgccggtggtacgaccaccctgaactcgatcgcgatcccctcctcg
aacgacccgagcaacgcgagcgcgatctggcggatcaacgactggacgggcactccgagc
ggcttcaagaacgccgacctgatgacgtacgcccatccctccgacgtccgcgccgccgcc
tggaccggcaatgtcgtcatcggcagcggcaccgagacctccgccttcccctgctacctc
tggaaggacgtcaacagcggactgctggtgtacttcaagctgaccgccgcgcaggccgcc
gccgcgcacaccctgcggatcggggtgacgacggcctacgccaacgggcggccgcaggtc
gtcgtcaacgacacctggacatcggcgatcccctccccgcccacccagccgagcacccgg
tcactgaccaacgggtcctaccggggcaacaaccacacgttcacctacagcgtgccggcc
agtgcctggcgcacggacaccggccagtacaacacgctgaagatcaacatcgtgagcggt
tcggggacgaccgcgtacctgagcgcgggcacgtcgatcgacgccctggatctactgacc
tga
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