Streptomyces griseorubiginosus: DWG14_02088
Help
Entry
DWG14_02088 CDS
T06099
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sge
Streptomyces griseorubiginosus
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sge03016
]
DWG14_02088 (rnd)
Enzymes [BR:
sge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DWG14_02088 (rnd)
Transfer RNA biogenesis [BR:
sge03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DWG14_02088 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AYC37869
UniProt:
A0AAI8KVG5
LinkDB
All DBs
Position
2404495..2405673
Genome browser
AA seq
392 aa
AA seq
DB search
MLEPREGIPPVIADEAALAEVIAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRRAGAGT
ALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIGMIPSRLFDTELAGRIAGFPRV
GLGAMVEGVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWALQEFDAIASAPPAEPRKDPWRRTSGMHKVRRRRQLAVVKELWEARDRIAQRRDVSPG
KVLSDAAIVEAALALPVNVHALAALNGFGHRMGRRQLEQWQAAVDRARGLAEVQLPQPGQ
PVTGPPPPRAWADKDPAAAARLSAARAAVSALAESLNMPQENLITPDTVRRVCWEPPSVV
SAESVGAALARLGARAWQVEQVTPVLVAALSA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagccgcgtgagggcattccgcccgtgatcgccgacgaggccgcgctcgccgag
gtgatcgccgcgttcgccgcgggcaccgggcccgtcgccgtcgacgccgaacgggcgtcc
ggctaccgctacggacagcgcgcctacctcgtccaactgcgccgcgccggcgcgggcacc
gcgctgatcgaccccgtggcctgtcccgacctgtccgggctcggcgaggcgctctccggt
gtcgagtgggtgctgcacgccgccacccaggaccttccctgcctccgcgagataggcatg
atcccctcccggctcttcgacaccgagctggccgggcggatcgccgggttcccccgggtg
gggctcggcgcgatggtcgagggcgtgctgggcttcgtcctggagaagggccactccgcc
gtcgactggtcgacccgcccgctccccgagccgtggctgcgctacgccgccctcgacgtg
gagctcctcgtcgacctgcgggacgccctggagaaggagctcgaccggcagggcaagctg
gagtgggcgctccaggagttcgacgcgatcgcctccgctccgccggccgagccgcgcaag
gacccgtggcgccggacctccgggatgcacaaggtacggcggcgtcggcagctggccgtc
gtcaaggagctgtgggaggcgcgggaccggatcgcccagcggcgggacgtgtcgccgggc
aaggtgctgtccgacgcggcgatcgtcgaagccgcgctcgcgcttccggtgaacgtgcac
gcgctcgccgcgctgaacggtttcgggcatcggatggggcggcggcagctggagcagtgg
caggccgccgtcgaccgggccaggggccttgccgaggtgcagttgccgcaaccgggacag
ccggttacggggcctccacccccgcgcgcttgggccgacaaggatcctgccgctgcggct
cggttgtctgcggcccgagcggctgtgtcggcgttggccgagtcgctgaacatgcctcag
gagaacctgatcactccggataccgtgcggagggtttgctgggagccgccgagtgtcgtg
agcgccgagtccgtgggggcggcgttggcgcggctcggggcgcgggcctggcaggtcgag
caggtgactcctgtgttggtggctgcgttgtccgcgtag
DBGET
integrated database retrieval system
