Streptomyces griseorubiginosus: DWG14_02958
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Entry
DWG14_02958 CDS
T06099
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03420
Nucleotide excision repair
sge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DWG14_02958 (uvrD2)
03430 Mismatch repair
DWG14_02958 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_02958 (uvrD2)
Enzymes [BR:
sge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWG14_02958 (uvrD2)
DNA repair and recombination proteins [BR:
sge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DWG14_02958 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
DWG14_02958 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
C1_1
DUF6011
Zn_ribbon_TiaS
AAA_11
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AYC38726
UniProt:
A0AAI8KZV0
LinkDB
All DBs
Position
complement(3403212..3405350)
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AA seq
712 aa
AA seq
DB search
MLEGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILQPSSVLAVTFTNR
AAGEMRGRLRQLGAAGVQARTFHSAALRQLQYFWPKAVGGSMPRLVDRKIQLVADAAAAC
RIRLDRGELRDVTGEIEWSKVTQTVPSDYALAAAKAGRETPRAAAEIAQLYAAYEDVKRE
RAVIDFEDVLLLTVAILQDRHDIADQVRSQYQHFVVDEYQDVSPLQQRLLELWLGQRDSL
CVVGDASQTIYSFTGATPDHLLDFRTRHPGATVVKLVRDYRSTPQVVHLANGLLAQARGR
AADHRLELISQRRSGPEPVYTEYTDEPAEAEGAARRIRDLMDAGVRASEIAILFRTNSQS
ETYEQALADAGVPYQLRGAERFFDRPEVRRAIVNLRGAARFGGNDTRLDDAVDLPSQVRA
VLSGEGWTSEPPAGSGAVRERWESLAALVNLAQDFAAARPGATLNDLVAELDERAGAQHA
PTVEGVTLASLHSAKGLEWDAVFLVGVAEGMMPITYAKTDEQIEEERRLLYVGVTRARER
LHVSWSLSRSPGGRPNRRPSRFLDGLRPGSTATAARAAAGGPGGVERGFTSPAGEVQRRT
RRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYERLREWRAVQAERSGQPAFCVFT
DKTLMAIAEAVPDDEHELTRIPGVGMRKLNRYGADVLAICAGQEVAQEEDED
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagggctcgacccggagcagcgcgaggtcgccaccgccctgcacggaccggtg
tgcgtgctggcgggtgccggcaccggcaagacccgggccatcacccaccgcatcgcctac
ggggtgcgggccgggatcctccagccctccagcgtgctcgccgtcaccttcaccaaccgc
gcagcaggggagatgcgcgggcgactgcgccagctcggcgcggcgggcgtccaggcgcgt
acgttccactcggccgccctgcgccagctccagtacttctggccgaaagccgtcggcggg
tccatgccccggctcgtcgaccgaaagatccagcttgtcgccgacgcggccgccgcgtgc
cgcatccgcctcgaccggggcgagctgcgggacgtcacgggggagatcgagtggtccaag
gtcacccagaccgtgccctccgactacgcgctcgcagccgcgaaggcgggccgtgagacc
ccccgcgccgcggccgagatcgcccagctctacgccgcctacgaggacgtcaagcgcgag
cgggccgtcatcgacttcgaggacgtgctgctcctgaccgtcgccatcctccaggaccgg
cacgacatcgccgaccaggtccgttcgcagtaccagcacttcgtggtcgacgagtaccag
gacgtcagccccctccagcagcgcctgctggagctgtggctcgggcagcgggacagcctg
tgcgtggtcggcgacgccagccagacgatctactccttcacaggagcaactcccgaccat
ctgctcgacttccgcacccgccaccccggggccaccgtcgtcaagctggtccgcgactac
cgctccaccccccaggtcgtccatctcgccaacggcctgctcgcccaggcccgcggccgc
gccgccgaccaccggctggaactgatctcccagcgccgttccggccccgagcccgtctac
accgagtacaccgacgagcccgccgaggccgagggcgccgcccggcgcatccgggatctc
atggacgcgggcgtgcgggccagcgagatcgccatcctgttccgtaccaactcccagtcc
gagacctacgagcaggccctcgccgacgccggagtgccctaccagctgcgcggcgccgag
cggttcttcgaccggcccgaggtccgcagggccatcgtcaacctccggggcgcggcccgc
ttcggcggcaacgacacccggctggacgacgccgtcgacctgccctcccaggtccgcgcc
gtgctgtcgggcgaaggctggaccagcgaaccgccggccgggtccggcgccgtcagggag
cgctgggagtcgctggccgccctggtgaacctcgcgcaggacttcgcggccgcccgcccc
ggggccacgctcaacgacctcgtggccgaactcgacgagcgggccggcgcccagcacgcc
ccgaccgtcgagggcgtcaccctcgcctccctgcactccgcgaagggcctggagtgggac
gccgtcttcctggtcggggtcgccgagggcatgatgccgatcacctacgccaagaccgac
gagcagatcgaggaggagcgccggctcctctatgtcggcgtcacccgtgcccgcgagcgc
ctccatgtctcctggtcgctctcccgctcgcccggcggccgccccaaccgccgccccagc
cgcttcctcgacggactgcgccccggctccaccgccaccgcggcacgggccgccgcgggc
ggtcccggcggtgtggagcgcggcttcaccagccccgcgggcgaggtccagagacgcacc
cggcgcaccccggcgcgctgccgggtctgcgggcgcacgctcaccgacgcgggcgagatg
aagctgatgcgttgcgaggactgtccctccgacatggacgaggggctctacgagcgactg
cgcgagtggcgggccgtgcaggcggagcgcagcggacagcccgcgttctgcgtcttcacc
gacaagaccctgatggcgatcgccgaggccgtccccgacgacgagcacgaactgacccgg
atcccgggcgtcggcatgcgcaagctcaaccgttacggagccgatgtgctggccatctgc
gcaggccaggaggttgcgcaggaagaagacgaggactga
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