Streptomyces griseorubiginosus: DWG14_03336
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Entry
DWG14_03336 CDS
T06099
Symbol
uvrD1_1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03420
Nucleotide excision repair
sge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DWG14_03336 (uvrD1_1)
03430 Mismatch repair
DWG14_03336 (uvrD1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_03336 (uvrD1_1)
Enzymes [BR:
sge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWG14_03336 (uvrD1_1)
DNA repair and recombination proteins [BR:
sge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DWG14_03336 (uvrD1_1)
MMR (mismatch excision repair)
Other MMR factors
DWG14_03336 (uvrD1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYC39103
UniProt:
A0AAI8L0G3
LinkDB
All DBs
Position
complement(3823525..3826008)
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AA seq
827 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHAEEPPPPPEDDHVPEPVPDDLFGGKFDVPPDRDAYYRDGAP
RPVLDAAALLDGLNENQRAAVVHSGTPLLIVAGAGSGKTRVLTHRIAHLLGERRVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPSEHDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILTAANAVIERNESRRPKNLWTNAGAGARITGYVADTEHDEAQFVADEIDRLT
DAGDAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNAVKR
FNVLMEELRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQESGEGEETGSLSDFLERVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTG
MEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSLRSAWGQPSYNPPSRFLE
EIPAQHVDWKRTGATAAPAGPVSGIAASLSSSRSRSSASGASGFATRRTSEKPVVALAVG
DRVTHDQFGLGTVVGVKGTGANAEATIDFGEAKPKRLLLRYAPVEKL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccctcgcgggcacgcg
gaggaacccccgccgccgcccgaggacgaccacgtgccggaacccgttccggacgacctg
ttcggcgggaagttcgacgtgcccccggaccgggacgcctactaccgcgacggcgccccc
cgcccggtgctggacgccgccgcgctcctggacgggctgaacgagaaccagcgcgccgcc
gtcgtgcactccggcaccccgctgctcatcgtggccggtgccggctccggcaagacccgg
gtgctcacccaccgcatcgcccacctcctcggtgagcgccgtgtccaccccggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcggatc
ctgcggagggagtcgaagaagctcgggttcacctcctccttctcgatctacgacgccgcc
gactccaagcgtctgatggccctggtctgccgcgacctggacctcgaccccaagaagttc
ccgccgaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgccctg
taccagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgaccacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctcgtcgacgagtaccaggacaccaaccacgcccagtacgcgctggtcagggagctg
gtcggcacctccgagcaccccgtcgacgtaccgccgagcgagcacgacctgccgcccgcc
gagctctgtgtcgtcggtgacgccgaccagtcgatctacgccttccgcggcgcgaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctcctggagcag
aactaccgctccacccagacgatcctcaccgccgccaacgccgtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaacgcgggcgcgggcgcgcgcatcaccggctat
gtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgtctcacc
gacgcgggcgacgcgaaggccggcgatgtcgccgtcttctaccgcaccaatgcgcagtcc
cgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtcctcgccaac
ccggaggactcggtgccgctgcgccggatcctcaacgtgcccaagcggggcatcggcgac
cgcgcggaggcgatgatcgacgccctctcccagcgcgagaagatcagcttcccgcaggcg
ctcaagcgcgtcgacgaggcgtacggcatggccgcgcgctccaccaacgccgtcaagcgg
ttcaacgtgctgatggaggaactccggaccatcgtcgagtccggcgcgggcccggcgacc
gtcctggaagccgtcctcgaacgcaccggttacctcgccgagttgcaggcctccaccgac
ccccaggacgagacccgcatcgaaaacctccaggaactcgccgccgtggccctggagttc
gagcaggagtccggcgagggcgaggagaccggctcgctctccgacttcctggagcgggtc
gcgctcgtcgccgactccgaccagatccccgacgaggacgaggacggctccggcgtcatc
accctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctcaccggc
atggaggacggcgtgttcccgcacatgcgcgccctcggccagaccaaggagctggaggag
gagcggcggcttgcgtacgtcggcatcacgcgcgcgcgtgagcggctgtacctgacccgg
tcctccctgcgcagtgcgtgggggcagccgtcgtacaacccgccctcccgcttcctggag
gagatcccggcgcagcacgtcgactggaagcgcacgggggcgaccgccgctcccgcgggg
ccggtctcgggcatcgccgcctcgctgtcctcgtcccggtcgcgttcctcggcgtcgggt
gcgtccggcttcgcgacgcgccggacctcggagaagccggtggtcgcgctggccgtcggc
gaccgggtcacccacgaccagttcgggctcggcaccgtggtcggggtcaagggcaccggc
gccaacgccgaggcgaccatcgacttcggcgaagccaagccgaagcggctgctgctgcgg
tacgcgccggtggagaagctgtag
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