Streptomyces griseorubiginosus: DWG14_04403
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Entry
DWG14_04403 CDS
T06099
Symbol
sigF_4
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sge
Streptomyces griseorubiginosus
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sge03021
]
DWG14_04403 (sigF_4)
Transcription machinery [BR:
sge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWG14_04403 (sigF_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
HTH_3
MarR
NirdL-like_HTH
DUF134
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AYC40153
UniProt:
A0AAI8L2H0
LinkDB
All DBs
Position
complement(4983049..4983873)
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AA seq
274 aa
AA seq
DB search
MSASTAPPQEAAPPQEAAPRSRGADTRALTQVLFGQLKGLQPGTPEHTRVRAALIEANLP
LVRYAAARFRSRNEPMEDVIQVGTIGLINAIDRFDPERGVQFPTFAMPTVVGEIKRYFRD
NVRTVHVPRRLHELWVQVNSATEDLTTAFGRMPTTAEIAERLRIGEDEVLSCIEAGRSYH
ATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLLVQLPEREQRILLLRYYSNLT
QSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagtaccgcgcctccccaggaggcggcccctccccaggaggcggccccccgc
agccgcggcgccgacacacgggcgctcacccaggtgctcttcggccagttgaaggggctc
cagccgggcacgccggagcacacccgggtgcgggcggcgctcatcgaggccaacctcccg
ctcgtgcgctacgcggccgcccgcttccgctcgcgcaacgagccgatggaggacgtgatc
caggtcggcaccatcgggctgatcaacgccatcgaccgcttcgacccggagcggggcgtg
cagttccccaccttcgcaatgccgaccgtcgtcggcgagatcaagcggtacttccgcgac
aacgtccgcacggtccacgtcccgcgccggctgcacgagctgtgggtgcaggtcaacagc
gccaccgaggacctgaccaccgccttcgggcgcatgcccacgaccgccgagatcgccgag
cggctgcgcatcggcgaggacgaggtgctgtcctgcatcgaggccggccggtcgtaccac
gccacctccctggaggcggcgcaggagggcgacggactgccgggcctgctggaccggctc
ggctacgaggacccggcgctggacggcgtggagcaccgcgacctggtccggcacctcctg
gtgcaactccccgagcgcgaacagagaatccttctgctgcgctactacagcaacctcacc
cagtcgcaaatcagcgcggaactcggcgtctcgcagatgcacgtttcgaggctactcgcg
cgtagctttcaacgactgcggtccgccaatcgcatcgacgcttag
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