Streptomyces griseorubiginosus: DWG14_08056
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Entry
DWG14_08056 CDS
T06099
Symbol
xynD_3
Name
(GenBank) Arabinoxylan arabinofuranohydrolase
KO
K20276
large repetitive protein
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DWG14_08056 (xynD_3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
aBig_2
Laminin_G_3
Big_4
PKD_4
Glyco_hydro_32N
DUF5018-rel
DUF5018
Laminin_G_2
GINT1_N
Pentaxin
Motif
Other DBs
NCBI-ProteinID:
AYC43748
UniProt:
A0AAI8LA14
LinkDB
All DBs
Position
complement(9035217..9040412)
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AA seq
1731 aa
AA seq
DB search
MTHFARPRLRARRRAGRLGGLTAAALLLGLTAPVLPAHAADTAGVADGPALWYKLDAASG
STVPDASGHGRDGTLNGTADWSNPGQGLAFNGSDTYIKVPDDVMKGMTSISVSMDVQIDP
AQSTPYFLYGFGNSSGGTGNGYLFATGNSLRTAIASGNWSTEQNTRPDDAHSLARGVWKQ
LTYTQTGSTGILYEDGVEVGRNTAVTITPGSIGAGSTTANYVGKSVYSGDKLFKGRIRDF
RVYDRALSPAEVDELTLPIAAEGVAADKAALSLGDTSAVTADLVLPKSGTAGGSTITWAS
DHPDVVSAAGKVTRPAAGEPDGHATLTATLKKGSATGTKSFEVTVLPAFDDRTATEKAAA
SLVVHTIDDVRGNLTLPTSGDYGTAVSWSSADKEVVADDGVVHRPAHGAGATAVELTATV
TKGAATATRTFTAKVTELPAKQALKGYMFSYFTGEGTSDGEQLYAALSKGDDPLKWRELN
DGKPVLTSTLGEKGLRDPFIIRSPEGDKFYQIATDLRIYGNGDWDAAQRTGSKSIMVWES
TDLVHWTDQRLVRISPDSAGNTWAPEAFYDAQRGEYVVFWASKLYDNAGHSGDTYNRMMY
ATTRDFYTFSEPRVWVDRGYSVIDSTMIQHDGTYYRLSKDERNNSSSTPNSKFIFEEKSD
SILGSWTPVAEGIGKGTMSAAEGPLVFKSNTENKWYAFLDEFGGRGYLPFETTDLDSGVW
TPSTGYDLPARPRHGTVLPVTQAEYDRLLRAYQPDRLVESVQDINVRTRTGEAPVLPATV
IATYADGVKRPVAVTWEDVPASKYAQPGTFTVTGSLPDGAAIPVLAEVTVSAEGPDIPAD
LLLHYGFDETSGNIAVDSSGHGYHGTYVGTPGFGTGVEDGSFKMSGDSGSPYVRIPNGVL
KNAGSVTVSTYAKWKGGSSFQWLFGLGPDSDRYLFATPSNGGNSLYSAITKASWSAESKL
TAGSQLTPGQWRHVTVTLDGATGRMVLYVDGVEAARTTTTIKPSELYAANKDYSGYIGKS
LYAADPSFGGEVDDFRIYDRALTAAEVMELSGNTAGIARATHPALKVDAIVDDADGKVTL
PMKEGTDLTALAPEFTLAHGAAISPASGSVQDFSKPVTYEVTGSDGKKRTWTVSALVMKS
PVLPGLNADPNIVRFGDTFYLYPTTDGFPGWSGTQFKAYSSTDLVHWKDHGVILDLGPDV
SWADSRAWAPTIAEKDGKYYFYFCADANIGVAVSDSPTGPFKDALGKPLLKAGLYSGQMI
DPAVFTDDDGQSYLYWGNGRAYVAPLNADMTSLDLTKMKDITPSDYREGSFVIKRGGTYY
FMWSENDTGDENYRVAYATGPSPTGPWTKRGVILEKDLSLGIKGPGHHSVVHVPNTDDWY
IAYHRFAILGGDGTHRETTVDKLEFDADGLIKKVVPTLTSIDPVSIVHAGADGSGTEGGA
IALHGTISGAGSPKWTVEKGAPCTFADPNSAATTVTCSDNGTFRVTLTGGRSSDTATVKV
ANAAPVVTSAAGPQSPVQLGRPAVVTAAFTDAGAGDTHSCVVDWKDGSAPRSGTVTASGC
RAEYTYAKAGIRRPVVTVTDDDGASDSRTLAELVVYDRAAGPVLGAGVLTSPAGAYPARP
TLTGHAAFSFAAAYLPGLTAPVGEVSFDFGPAKLKFRSTGSDWLVVSGSQAVYQGSGRVN
GTDGYAFRVTATDAPDTFRLRIWKKAGGEVVYDNLTGAKITGLVAIGGGRR
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacttcgcacgtccgcgcctgcgcgcgagacgccgggcgggccgcctgggcggt
ctgaccgccgcggcactgctcctgggcctcaccgcacccgtgctccccgcccacgcggcg
gacaccgcgggcgtcgccgacgggcccgccctctggtacaagctcgacgccgcctccggc
agcaccgtcccggacgcctccggccacggccgcgacggcaccctgaacggcaccgccgac
tggtcgaacccggggcaggggctcgccttcaacggctccgacacctacatcaaggtgccc
gacgacgtcatgaagggcatgacctcgatcagcgtctccatggacgtgcagatcgacccg
gcacagagcacgccgtacttcctctacggcttcggcaactccagcggcggcaccggcaac
gggtacctcttcgccaccggcaactccctgcgcaccgcgatcgcgagcggcaactggtcg
accgagcagaacaccaggcccgacgacgcgcacagcctggcccgcggggtgtggaagcag
ctcacctacacccagaccggcagcaccggcatcctctacgaggacggcgtcgaggtcggc
cgcaacacggccgtcaccatcacgcccggctccatcggcgccggctcgaccaccgccaac
tacgtgggcaagtccgtctattcgggcgacaagctcttcaagggccgcatccgggacttc
cgcgtctacgaccgcgccctcagccccgccgaggtcgacgagctgaccctgccgatcgcg
gcggagggtgtcgccgccgacaaggccgcgctgagcctcggcgacaccagcgcggtcacg
gccgacctggtcctccccaagtccggcacggccggcgggtcgaccatcacctgggccagc
gaccaccccgacgtggtgtccgccgccggcaaggtgacccgccccgccgccggcgagccg
gacggccacgccaccctcacggcgaccctgaagaagggttccgccaccggcaccaagagc
ttcgaggtcacggtcctgccggccttcgacgaccggacggccaccgagaaggcggccgcg
agcctcgtcgtgcacaccatcgacgacgtgcgcggcaacctcaccctgccgacgagcggt
gactacggcacggccgtctcctggtcctccgccgacaaggaggtggtcgcggacgacggc
gtggtccaccgccccgcgcacggcgccggcgccacggccgtcgaactgaccgccaccgtc
accaagggcgcggccacggcgacccgcaccttcaccgcgaaggtcaccgaactcccggcg
aagcaggccctcaagggctacatgttcagctacttcaccggcgagggcacctcggacggc
gagcagctctacgccgcgctcagcaagggcgacgacccgctcaagtggcgggagctgaac
gacgggaagccggtcctgacctccacgctcggcgagaagggcctgcgcgacccgttcatc
atccgctcccccgagggcgacaagttctaccagatcgccaccgacctcaggatctacggc
aacggcgactgggacgcggcccagcgcaccggcagcaagtccatcatggtctgggagtcc
accgacctggtgcactggacggaccagcggctggtcaggatctcccccgacagcgcgggc
aacacctgggcgccggaggcgttctacgacgcgcagcgcggcgagtacgtggtcttttgg
gcgtcgaagctgtacgacaacgcagggcactcgggcgacacctacaaccgaatgatgtac
gcgaccacccgtgacttctacaccttcagcgagcccagggtctgggtcgaccgcggctac
tcggtcatcgactccacgatgatccagcacgacggcacctactaccggctgtcgaaggac
gagcggaacaactcctcctccacgcccaacagcaagttcatcttcgaggagaagagcgac
tcgatcctcggttcgtggacccccgtcgccgagggcatcggcaaggggacgatgagcgcc
gccgagggaccgctggtcttcaagtcgaacaccgagaacaagtggtacgccttcctcgac
gagttcggcggccgcggctacctccccttcgagaccaccgacctcgactcgggcgtctgg
accccgtcgaccggctacgacctgccggccagaccccggcacggcaccgtcctgccggtc
acccaggccgagtacgaccggctgctgcgcgcctaccagcccgaccggctcgtggagagc
gtccaggacatcaacgtgaggacacgcacgggtgaggcgccggtgctgcccgccaccgtg
atcgccacgtacgccgacggagtcaagcgccccgtagcggtcacctgggaggacgtgccg
gcgtcgaagtacgcccagcccggcaccttcacggtcaccggcagcctcccggacggcgcc
gcgatcccggtcctggccgaggtcaccgtctccgccgagggtcccgacatcccggccgac
ctgctgctgcactacggcttcgacgagacgtccggcaacatcgcggtcgactccagcggt
cacggctaccacggcacctacgtcggcacgcccggcttcggcaccggcgtcgaggacggc
tcgttcaagatgtccggtgactccggctcgccgtacgtgaggatcccgaacggtgtgctg
aagaacgccggcagcgtgaccgtgtcgacgtacgccaagtggaagggcggcagcagcttc
cagtggctgttcgggctcggccccgacagcgacaggtacctgttcgccacgccctccaac
ggcggcaacagcctctactcggcgatcaccaaggcgagttggtcggccgagtcgaagctg
acggcgggctcgcagctcaccccgggccagtggcggcacgtcaccgtgaccctcgacgga
gcgaccggccggatggtcctctacgtcgacggcgtcgaggcggcccgtacgacgaccacc
atcaagccgtccgagctctacgccgcgaacaaggactacagcggctacatcggcaagtcc
ctgtacgcggccgacccgtccttcggcggcgaggtcgacgacttccgcatctacgaccgt
gcgctgaccgccgccgaggtcatggagctcagcggcaacaccgcgggcatcgcgagggcg
acgcacccggcgctgaaggtcgacgcgatcgtggacgacgccgacggcaaggtcacgctg
cccatgaaggagggcaccgatctgaccgcgctggcaccggagttcaccctcgcgcacgga
gcggcgatcagccccgcctccggcagcgtgcaggacttcagcaagccggtgacctacgag
gtgaccgggtccgacggcaagaagcgcacctggacggtgtcggcgctcgtcatgaagagc
ccggtgctgcccggcctcaacgccgacccgaacatcgtgcggttcggcgacaccttctac
ctctacccgaccaccgacggcttcccgggctggagcggcacgcagttcaaggcgtactcg
tccaccgacctggtccactggaaggaccacggagtcatcctcgacctcggccccgacgtg
tcctgggcggacagcagggcctgggcgccgaccatcgccgagaaggacggcaagtactac
ttctacttctgcgccgacgccaacatcggtgtcgcggtgtccgactcgccgaccggtccg
ttcaaggacgcgctgggcaaacccctcctgaaggccggcctgtacagcggccagatgatc
gacccggccgtgttcacggacgacgacgggcagtcgtacctctactggggcaacgggcgg
gcctacgttgcgccgctgaacgccgacatgacctccctcgacctcacgaagatgaaggac
atcacgcccagcgactaccgcgagggctcgttcgtcatcaagcggggcggcacctactac
ttcatgtggtcggagaacgacaccggcgacgagaactaccgcgtcgcctacgccaccggc
ccctcccccaccggcccctggaccaaacggggcgtcatcctggagaaggacctctcgctc
ggcatcaagggacccggccaccactcggtcgtccatgtcccgaacaccgacgactggtac
atcgcctaccaccggttcgcgatcctcggcggcgacggcacgcatcgcgaaacgaccgtc
gacaagctggagttcgacgccgacggcctgatcaagaaggtcgtgcccacgctgacgagc
atcgacccggtgagcatcgtgcacgccggcgcggacggcagcggcaccgagggcggcgcg
atcgcgctgcacggcacgatctccggggcgggcagcccgaagtggacggtcgagaagggg
gctccctgcaccttcgccgacccgaactcggctgccacgacggtgacgtgttccgacaac
ggcaccttccgggtcacgctcaccggcggccgcagcagcgacacggcgacggtgaaggtg
gccaacgcggcaccggtggtcacctccgccgcgggtccgcagtcccccgtgcagctcggc
aggcccgcggtcgtcacggccgcgttcaccgacgcgggtgccggtgacacgcacagctgc
gtggtcgactggaaggacggcagcgcgccgcgctccggcacggtcaccgcttccggctgc
cgggccgagtacacgtacgccaaggccgggatccgccggccggtggtcaccgtgaccgac
gacgacggcgcctcggacagccggacgcttgcggagctggtcgtctacgaccgtgccgcc
ggtccggtgctcggtgccggtgtcctcacctccccggccggcgcctacccggccaggccg
acgctgacgggccacgccgccttctccttcgcggcggcctacctgccgggactcacggcg
ccggtgggcgaggtctccttcgacttcggcccggccaagctgaagttccgctcgacaggg
tccgactggctggtggtatccggctcccaggccgtctaccagggttccggccgggtcaac
ggcacggacgggtacgccttccgggtcaccgccacggatgccccggacaccttccgcctg
cggatctggaagaaggcgggcggtgaggtcgtctacgacaacctcaccggcgcgaagatc
accggcctcgtcgccatcggcggcggccggcggtag
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