Stenotrophomonas geniculata: RKE57_00880
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Entry
RKE57_00880 CDS
T09411
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgen03000
]
RKE57_00880
Transcription factors [BR:
sgen03000
]
Prokaryotic type
Helix-turn-helix
XRE family
RKE57_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_25
HTH_26
Xre-like-HTH
HTH_24
HTH_23
Sigma70_r4
HTH_37
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
WNF10729
LinkDB
All DBs
Position
complement(199797..201164)
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AA seq
455 aa
AA seq
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MNYSATQRQLGLRLLRLREQRGYSQADLARALGLSASYLNQIERNKRPLTPAVQKKLGEV
LGDVSSLFDEDEPAALQEALGETLRDLGLAEVSATELRALAGNLPQVSRALLDLHRRHLA
LREHAAALEFQLGEPGAGSTLPAGDQVREFFNRMHNHIPELDELAERLFAEWGLSPGHVA
PRLRQLLADRHGVLVEVAALQAGREKRQFDAGARRLWLPDYLEPGQQAFQMAAELALHGY
LPQIDAVVARAGFTDEARIAQARIGLSNYFAGALVMPYMRFLRAAEASSYDIELLAHQFG
VGFEAVCHRLSTLARRSAPGLPFFFIRVDRAGNVSKRHSATDFHFSQVGGSCPLWIVYEA
FNQPGRILTQTARMPDGRRHFWLARQVSSGPVGHGQPRKTFAVALGCDLQHAERLVYSLG
LDVQSPGNSVSIGPGCRVCPREDCMQRAFAQLPGR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgaattattcagccacccagcgacaacttggcctgcgcctgctgcggctgcgcgagcag
cgtggttacagccaggccgacctggcacgtgcgctggggctgtcggccagctacctgaac
cagatcgagcgtaacaagcgcccgttgacgccggcggtgcaaaagaagctgggtgaggtg
ttgggcgacgtttcctcgctgttcgacgaagatgagcccgccgcactgcaggaggcactg
ggcgagaccctgcgcgacctgggcctggcggaggtgagcgcgaccgagctgcgcgccttg
gccggcaacctgccgcaggtcagccgcgccctgctggacctgcatcggcgccacctggcg
ctgcgcgaacatgccgccgccctggaattccagctgggcgagccgggtgccggcagcacc
ctgcccgccggtgaccaggtgcgcgagttcttcaaccgcatgcacaaccacatccccgag
ctggacgaactggccgagcgcctgttcgccgagtggggactgtcgcccgggcatgtggca
ccacgcctgcgccagctgctggccgaccgccatggcgtgctggtggaagtggcggcgctg
caggccgggcgcgagaagcgccagttcgatgccggtgcacggcggctgtggctgcccgat
tacctggaaccgggccagcaggcattccagatggccgccgaactggccctgcacggctac
ctgccgcagatcgatgcggtggtggcacgtgccggcttcaccgatgaggcacgcatcgcg
caggcgcgcatcggcctgtcgaactatttcgccggcgcgctggtgatgccgtacatgcgc
ttcctgcgtgcggccgaggccagcagctacgacatcgaactgctggcgcatcagttcggc
gtcggcttcgaggcggtgtgccatcggctgagcacactggcacggcgcagtgcgccgggg
ctgccgttcttcttcatccgcgtggaccgtgcgggcaatgtgtccaagcgccattcggcc
accgatttccatttctcgcaggtgggtgggtcgtgcccgctgtggatcgtctacgaggcg
ttcaaccagcccgggcgcatcctgacccagaccgcgcgcatgcccgacgggcgccgccac
ttctggctggcgcggcaggtcagcagcgggccggtggggcatggccagccgcgcaagacc
ttcgcggtggcgctgggctgtgacctgcagcatgccgagcggctggtgtattcgctgggg
ctggatgtgcagagcccgggcaattcggtgtcgattggcccgggctgccgggtgtgcccg
cgcgaggactgcatgcagcgcgcgttcgcgcaattgccggggcggtag
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