Stenotrophomonas geniculata: RKE57_01085
Help
Entry
RKE57_01085 CDS
T09411
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_01085
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNF10767
LinkDB
All DBs
Position
complement(235607..238465)
Genome browser
AA seq
952 aa
AA seq
DB search
MSLKTTPLRNAIVIALAASCTTPAFAQSAGDTPTNLDRIEITGSRIRQASVETAQPVVAL
SRAEIEKKGYINVADILQDVTAAGAPSLSRSSSLSSSRDFGGTYVSLRNLGPERSLVLID
GRRMGVSAGGYSDLASIPSAIVERVEVLTDGASALYGSDAIAGVVNIITRKNFDGGEASV
YVGQYGEGDGQKRSYSATFGKTFDRGWFSVGAERTKEDEILGSEREFSRYPGGPRHADDV
DALSPTTQWGTVTVGGKPLTVGPGGNPSQAGNFHTPDPADGANAKTNMSLLSGLERTSVF
ANGGFSITDNLRIVADALYSKRESTKHLAGYPYSVSAAQARNGTRAALSKDSTFNKWGQD
VLFSHRTEELPRGTENNLDTKRASIGLEGSFETGSRYWDWNVSYMYNRNEGERIGTGSMY
QPHVDLAVGPSFMDGTVARCGTPGAVIAGCVPWNPAAPMGYAGPGSLGNQDVQDYLFTRF
VDKMKSTTKVASANISGSLFTLPAGDIMGAMGFEHRSEEASYTPDLMVQKGQIAGTTGQP
TRGDYSLNEVYLEMQVPLLADMPFARELSLDLAGRYTDYNTFGSTTNSKFGLKWKPIDSL
LVRATYGTGFRAPTVDDLYGGAVSSRDSFTDPCDTKFGIAASSPTVAARCKALNVPANFR
QQTGADGNLANRPGQQATSDFNSGSNPELKPETAKTWTVGLVYSPEFVQGLDVSLDWWKI
RINNAIVGESATDILNQCYVQGVDSACGRFTRSTAAATRGQVSALDRSLVNAGYRETAGY
DIGVRYRLPETAYGKFAINWNTTYTDYLEQRNDSAATTPVEQKTGWQGNFRVRSTFNLDW
QYGDLGIGWTARYYSGMKEACSYDLAGGPDCNMAGFVSPYTDAQPSRKVGSNTFHDLQVR
YSLPWDGTVSLGVNNVFDHQGPIMYSQPNSSFTYYGGFDIGRFMYMKYQQRF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaaaaccactccgctgcgcaacgcgatcgtcatcgcgctggccgccagctgc
accacccccgccttcgcacagagcgccggcgataccccgaccaacctcgaccgcatcgag
atcaccggctcgcgcatccgccaggccagcgtcgagaccgcacagccggtcgtcgcgctc
agccgcgccgagatcgagaagaagggctacatcaacgtcgccgacatcctgcaggacgtc
accgccgccggtgctccgagcctgagccgctcgtcgtcgctgagttcttcgcgcgacttc
ggcggcacgtacgtcagcctgcgcaacctcggcccggaacgcagcctggtgctgatcgac
ggccgccgcatgggcgtcagcgccggtggctactccgacctggcttcgattccgtccgcc
atcgtcgagcgcgttgaagtgctgaccgacggcgcatccgcgctgtacggctcggacgcc
atcgccggtgtggtcaacatcatcacccgcaagaacttcgacggtggcgaagccagcgtg
tacgtcggccagtacggtgaaggcgacggccagaagcgctcctacagcgccaccttcggc
aagaccttcgaccgcggctggttcagcgtcggcgccgagcgcaccaaggaagacgagatc
ctcggcagcgagcgcgagttcagccgttacccgggtggcccgcgccacgccgatgacgtc
gacgcgctgagcccgaccacccagtggggcaccgtcaccgtcggcggcaagccgctgacc
gtgggcccgggcggtaatccgagccaggctggcaacttccacaccccggacccggctgat
ggtgccaacgccaagaccaacatgagcctgctgagcggtctggagcgcacctcggtgttc
gccaacggtggtttctcgatcaccgacaacctgcgcatcgtggccgacgcgctgtacagc
aagcgcgagtcgaccaagcacctggccggctacccgtactcggtatcggccgcacaggcc
cgcaatggcacccgtgctgccctgtccaaggacagcaccttcaacaagtggggccaggac
gtcctgttctcgcaccgcactgaagaactgccgcgcggcaccgagaacaacctggatacc
aagcgcgccagcatcggcctggaaggcagcttcgaaaccggttcgcgttactgggactgg
aacgtcagctacatgtacaaccgcaatgaaggcgagcgcatcggtaccggcagcatgtac
cagccgcacgtcgacctggcggtcggcccgtccttcatggatggcaccgtggcacgctgc
ggcactccgggtgcggtgattgccggctgcgtgccgtggaacccggccgcgccgatgggc
tatgcgggcccgggctcgctgggcaaccaggacgtgcaggactacctgttcacccgcttc
gtggacaagatgaagagcaccaccaaggtggccagcgccaacatctccggctcgctgttc
actctgccggccggtgacatcatgggtgcgatgggcttcgagcaccgcagcgaagaggcc
agctacaccccggacctgatggtgcagaagggccagatcgccggcaccaccggccagccg
acccgtggcgattactcgctcaacgaggtctacctggaaatgcaggtgccgctgctggcc
gacatgccattcgcgcgtgaactgtcgctggacctggccggtcgctacaccgactacaac
accttcggttcgaccaccaacagcaagttcggcctgaagtggaagccgatcgacagcctg
ctggtgcgcgcgacctacggtaccggcttccgtgcacccaccgtggacgatctctacggc
ggcgccgtgtccagccgcgattcgttcaccgatccgtgcgatacgaagttcggcatcgcc
gccagcagcccgaccgtggcagcacgctgcaaggcgctgaatgtgcccgccaacttccgt
cagcagaccggtgcggacggcaaccttgccaaccgcccgggccagcaggccacctccgat
ttcaactcgggttccaacccggaactgaagccggaaaccgccaagacctggactgtcggc
ctggtctacagcccggaattcgtgcagggcctggacgtcagcctggactggtggaagatc
cgcatcaacaacgccatcgtcggcgagtcggccaccgacatcctcaaccagtgctacgtg
cagggcgtggattcggcctgcggtcgcttcacccgttccaccgctgcggccacccgtggc
caggtctcggcgctggatcgttcgctggtcaacgctggctatcgcgaaaccgccggctat
gacatcggcgtgcgttaccgcctgccggaaaccgcgtacggcaagttcgccatcaactgg
aacaccacctacaccgactacctggagcagcgcaacgacagcgccgctaccacgccggtg
gagcagaagaccggctggcagggcaacttccgcgtgcgttcgaccttcaacctggattgg
cagtacggcgatctgggcatcggctggaccgcccgctactactcgggcatgaaggaagcc
tgctcgtatgacctggccggtggcccggactgcaacatggccggcttcgtctcgccgtac
accgatgcgcagccgagccgcaaggtgggctccaacaccttccacgacctgcaggtgcgt
tacagcctgccgtgggacggcaccgtgtcgctgggcgtgaacaacgtcttcgaccaccag
ggtccgatcatgtacagccagccgaacagcagcttcacctactacggtggcttcgacatc
ggtcgtttcatgtacatgaagtaccagcagcgcttctaa
DBGET
integrated database retrieval system
