Stenotrophomonas geniculata: RKE57_01320
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Entry
RKE57_01320 CDS
T09411
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RKE57_01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_01320
Enzymes [BR:
sgen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RKE57_01320
DNA repair and recombination proteins [BR:
sgen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RKE57_01320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WNF10814
LinkDB
All DBs
Position
286702..287502
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AA seq
266 aa
AA seq
DB search
MRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLTDPMFRPDGHHCFYRDA
ITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYGNLSVVSFYIPSGSSGDLRQ
GFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEERDWLN
ALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFITPGLR
DKLRSCSIYRDERFSDHAPFTVDYDL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagtttcaacgccaatggcatccgttccgccgcgaccaagggcttcctc
gactggttccgtgcccaggacgccgacgtcctgtgcatccaggaaaccaaggcccaggaa
gaccagctgaccgacccgatgttccgcccggatggccaccattgcttctaccgcgatgcc
atcaccaagaagggctacagcggggtggccatctacagcaagcgcgagccggatcaggtc
atcacctcgctgggctgggccccgttcgacgacgaaggccgctacatcgaggcgcgctac
ggcaacctcagcgtggtctccttctacatcccgtccggcagctcgggcgacctgcgccag
ggtttcaagttcgaagtgatggaatggctgcggccgatcctggaggagtgggcgcgcagc
ggccgcgactacgtgctgtgcggcgactggaacatcgtgcgttcggcgctggacatcaag
aactggaagtccaaccagaagaattccggctgcctgccggaggagcgcgactggctcaac
gccctgtgcgccgaccacggccaggccaccgatgtcgccgccggccgtggctgggccgat
gcctaccgcctgctcaaccccaccggcgaggattacacctggtggagcaaccgcggcgcc
gcccgtgcgaacaacgtcggttggcgtatcgactaccagttcatcactccgggcctgcgc
gacaaactgcgtagctgttcgatctaccgcgacgagcgcttctccgaccacgccccgttc
accgtggactacgacctgtga
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