Stenotrophomonas geniculata: RKE57_02125
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Entry
RKE57_02125 CDS
T09411
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgen03009
]
RKE57_02125
Enzymes [BR:
sgen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RKE57_02125
Ribosome biogenesis [BR:
sgen03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RKE57_02125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WNF10964
LinkDB
All DBs
Position
455463..456164
Genome browser
AA seq
233 aa
AA seq
DB search
MKLVKLIANLGYGSRKQVQWMFREGRVTDADGEVLYADDQVPHEAIRVDGEPLDPPVGLS
IALHKPAGYTCSTKDTGRLIYDLLPPRFRDRDPVLSTVGRLDRETSGLLLLTDDGGLLHR
IISPKSKLPKVYEVELSEDLRGDEVALFASGTLMLESEKTPLLPAELEVVDARRARLVLH
EGRYHQVRRMFAATGNHVQALHRSRVGGLDLQGLDEGQWRQLTSTDLDTLFAP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctggtcaagctcatcgccaacctgggctacggcagccgcaagcaggtgcagtgg
atgttccgcgaaggccgcgtcaccgacgccgacggcgaggtgctgtatgccgacgaccag
gtgccgcacgaggcgatccgcgtcgacggcgagccgctggacccgccggtgggcctgtcg
atcgcgctgcacaagccggccggctacacctgctcgaccaaggacaccggccgcctgatc
tacgacctgctgccgccgcgcttccgcgaccgcgatccggtgctgtctacagtgggccgc
ctcgaccgcgagaccagtggcctgctgctgctgaccgacgacggtggcctgctgcaccgg
atcatctcgccgaagtcgaagctgccgaaagtctatgaggtcgagttgagcgaggacctg
cgcggcgacgaggtggcgctgttcgccagcggcacgctgatgctggagtccgagaagacg
cccctgctgccggctgaactggaagtggtggatgcgcgtcgcgcgcgcctggtgctgcac
gaaggccgctaccatcaggtacgccgcatgttcgccgccacgggcaaccacgtgcaggcc
ctgcaccgcagccgcgtcggcgggctggacctgcaggggctggacgaagggcaatggcgg
cagctcacttccaccgacctggatacgctgttcgctccatga
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