Stenotrophomonas geniculata: RKE57_02405
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Entry
RKE57_02405 CDS
T09411
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00521
Streptomycin biosynthesis
sgen00523
Polyketide sugar unit biosynthesis
sgen00541
Biosynthesis of various nucleotide sugars
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01250
Biosynthesis of nucleotide sugars
Module
sgen_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RKE57_02405 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RKE57_02405 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RKE57_02405 (rfbC)
Enzymes [BR:
sgen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RKE57_02405 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
WNF11018
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All DBs
Position
519195..519752
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AA seq
185 aa
AA seq
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MKVIETKLPGCAVIEPAVFGDARGYFFETWNAERFAALGLPDRFVQSNVSTSAQGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPTFGQWEAVVLSAENRKQFWIPEGFAHGFA
VLSERALFSYLCTDVYVKEADAGIRWNDADIAVDWPVSAPTLSAKDETAPFLKDIAEDRL
PVYVP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtaattgaaaccaagttgcccggctgcgcggtgatcgagccggctgtgttcggc
gatgcccgcggttacttctttgaaacctggaatgccgagcgtttcgccgcgctgggcctg
ccggatcgtttcgtgcagagcaacgtgtccacctcggcgcagggcgtgctgcgtggcctg
cattaccagtggccgcgcccgcagggcaagctggtcagcgtgctggaaggcgaggtctat
gacgtggccgtggacatccgccgcggctcgccgaccttcggccagtgggaagcggtggtg
ctgagcgctgaaaacaggaagcagttctggattccggaaggcttcgcgcacgggtttgcc
gtgctctccgaacgtgcactgttcagctatctgtgcacggacgtctacgtcaaggaagcg
gatgcaggtatccgctggaatgacgccgatatcgcggtggactggccggtgagtgcaccg
accctgtcggccaaggacgagaccgcgcccttcctgaaggacattgccgaagaccgcctg
ccggtctacgtgccatga
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