Stenotrophomonas geniculata: RKE57_02545
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Entry
RKE57_02545 CDS
T09411
Name
(GenBank) glycosyl hydrolase family 18 protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00520
Amino sugar and nucleotide sugar metabolism
sgen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RKE57_02545
Enzymes [BR:
sgen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
RKE57_02545
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Big_7
fn3
PKD
BiPBP_C
CBM_5_12
PKD_4
Motif
Other DBs
NCBI-ProteinID:
WNF11045
LinkDB
All DBs
Position
complement(549502..551601)
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AA seq
699 aa
AA seq
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MYDPIVRSAERATRSCRPRRLAWLLAVAAGAAALPGLAQAASCAGVAQWDQARIYRAGDT
LQKGGVLYRANQDIWNAPPDHPAGAPYYTNLGACDGSGANQPPVVSLTSPANGATFSAGS
TVNVTANASDPDGSVAKVEFFRDGSTLGVATSAPYAASWANASAGSHTLRAVATDNNNAT
SSTATITIIVNAAGGDTTAPSVPGGLAVGTRTANSIALSWSPSTDNTGGSGVAGYDVYRN
GSLVGSPSSASYVDGGLTASTTYRYRVRARDNAGNASAQGTEISATTLAGDGGTTGKRVI
GYFTQWGIYGRNYRVKNIDSSGSAARLTHINYAFGNVRNNRCEVGITQPSDPNSGAGGDA
FADYTKAFSAAESVSGSADTWDQPLRGNWNQLKQLKAKYPGMKVLISLGGWTWSRGFSSA
ARPENRQAFVASCIDAYIKGNLPVTDGAGGAGAALGVFDGIDIDWEYPVACGIECGKPED
NANFTALMAEFRRQLDAVRPGLLLTVAVGAGIDKIRVTDPAAYHPYLDYINVMTYDFHGA
WDAKTNHQSALFDSPNDPSTGDQKLYNSNDAIEAFISRGVPAAKLNLGIGYYGRGWTGVA
NANNGLYQTATGAAPGTYEAGIEDWKVLKNLAWPGYTDNTAGATWIYNGSTLWSFDTPAN
ITRKMGYVKTQGLGGAFVWEFSGDDAQGTLTKAVSDGLK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacccgattgtgcgcagtgccgaacgtgcgacccgaagctgtcgtccccgccgc
ctggcctggctgcttgccgtggccgccggtgccgccgccctgcccggcctggcgcaggcc
gccagctgtgccggggtggcccagtgggaccaggccaggatctaccgggccggcgatacc
ctgcagaaaggaggcgtcctctatcgggcgaaccaggacatctggaacgcgccgccggac
catccggccggtgcgccctactacaccaacctcggcgcctgcgatggcagcggcgccaac
cagccgccggtggtcagcctgacctcgccggccaacggcgccaccttcagtgccggcagc
acggtcaacgtgactgccaacgccagtgatccggacggcagcgtcgccaaggtcgagttc
ttccgcgatggcagcacgctgggcgtggccaccagtgcgccgtacgcggccagctgggcc
aatgccagcgccggcagccacaccctgcgcgcggtggccactgataacaacaacgccacc
agcagcaccgcgaccatcaccatcatcgtcaacgccgccggtggcgataccaccgcaccg
agcgtgccgggcggactggcggtcggtacgcgcaccgccaacagcatcgcactcagctgg
agcccgtccaccgacaacaccggcggcagcggcgtggccggctacgacgtgtaccgcaac
ggcagcctggtcggttcaccgtccagtgccagctatgtcgacggcgggctgactgcctcc
accacctaccgctaccgcgtgcgcgcccgcgacaacgccggcaatgcgtcggcacagggc
accgagatcagcgccaccacgctggccggtgacggtggcaccaccggcaagcgggtcatc
ggctacttcacccagtggggcatctacggccgcaactaccgggtcaagaacatcgacagc
agcggctcggccgcacgcctgacccacatcaactacgcgttcggcaacgtgcgcaacaac
cgctgcgaagtgggcatcacccagccgtcggatccgaacagcggtgccggtggcgacgcc
ttcgccgactacaccaaggccttcagtgccgccgagagtgtcagcggcagcgccgatacc
tgggaccagccgctgcgcggcaactggaaccagctcaagcagctcaaggccaagtacccg
ggcatgaaggtgctgatctcgctgggtggctggacctggtcgcgcggcttctccagcgcg
gcgcgcccggaaaaccgccaggcctttgtcgcctcgtgcatcgacgcctacatcaagggc
aacctgccggtgaccgacggtgccggtggcgccggtgccgcgctgggcgtgttcgacggc
atcgacatcgactgggaatacccggtggcctgcggcatcgaatgcggcaagccggaagac
aacgccaacttcaccgcactgatggccgagttccgccgccagctcgatgcggtgcgtccg
ggcctgttgctgacggtggcggtgggcgccggcatcgacaagatccgcgtcaccgatccg
gccgcgtaccacccgtacctggactacatcaacgtgatgacctacgacttccacggtgcg
tgggatgcgaagaccaatcaccagtcggcgctgtttgattcgccgaatgatccgtccacc
ggcgaccagaagctgtacaacagcaacgacgccatcgaggccttcatcagccgaggcgtt
cccgccgccaagctcaacctgggcatcggctactacgggcgcggctggaccggtgtggcc
aacgccaacaacggcctgtaccagaccgccaccggcgccgcgccgggtacctacgaggcc
ggcatcgaagactggaaggtgctgaagaacctggcgtggccgggctacaccgacaacacc
gccggtgccacctggatctacaacggcagcacgctgtggagcttcgataccccggccaac
atcacccgcaagatgggctacgtgaagacccagggcctgggcggcgcgttcgtctgggag
ttcagtggtgacgatgcacagggcacgctgaccaaggcggtcagtgatggcctgaaataa
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