Stenotrophomonas geniculata: RKE57_02705
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Entry
RKE57_02705 CDS
T09411
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00260
Glycine, serine and threonine metabolism
sgen00460
Cyanoamino acid metabolism
sgen00630
Glyoxylate and dicarboxylate metabolism
sgen00670
One carbon pool by folate
sgen00680
Methane metabolism
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01120
Microbial metabolism in diverse environments
sgen01200
Carbon metabolism
sgen01230
Biosynthesis of amino acids
sgen01240
Biosynthesis of cofactors
sgen04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RKE57_02705 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RKE57_02705 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RKE57_02705 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RKE57_02705 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RKE57_02705 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RKE57_02705 (glyA)
Enzymes [BR:
sgen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RKE57_02705 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Glyco_hydro_92
Motif
Other DBs
NCBI-ProteinID:
WNF11076
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All DBs
Position
600828..602081
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AA seq
417 aa
AA seq
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MFPRDVRIESYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIV
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYVEQDCVDLANWIADVLDAPNDDAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaatcctacgatcccgaactggccaaggccatcgcc
gctgaaacccagcgccaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcgcagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgagcagcttgcgatcgac
cgcctgaagcagctgttcggggccgactacgccaacgtgcagccgcacagcggttcgcag
gccaaccaggcggtgtacttcgccctgctgcagccgggtgacaccatcctcggcatgagc
ctggcccatggtggccacctcacccacggtgccaaggtgaatgcctcgggcaagctgttc
aacgccgtgcagtacggcgtgaacgaccagggcctgatcgattacgacgaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtggccggcttctcggcctattcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggtcgccgcaggcgtgtaccccagcccgctggagcacgcc
cacgtggtcacctccaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtc
gccaagggcgccgacgaagacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcactg
gagccgggcttcaaggcctaccagcagcaggtggtgaagaacgcccaggcgatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggtggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggacgcggaagcggcgctgggcaaggcg
cacatcaccgtcaacaagaactcggtgccgaacgacccgcgttcgccgttcgtcacctcg
ggcctgcgcctgggtaccccggcggtgaccacccgtggttacgtcgagcaggactgcgtg
gacctggccaactggattgccgacgtgctcgacgcgccgaacgatgacgccgtgatcgcc
cgcgtgcgcgacgccgtcagcgcgcagtgccgcaagtacccggtctacggctga
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