Stenotrophomonas geniculata: RKE57_03325
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Entry
RKE57_03325 CDS
T09411
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgen03000
]
RKE57_03325
Transcription factors [BR:
sgen03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RKE57_03325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
DUF6381
MCCD1
Motif
Other DBs
NCBI-ProteinID:
WNF11193
LinkDB
All DBs
Position
complement(734194..735156)
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AA seq
320 aa
AA seq
DB search
MNLRDLKYLVALADHKHFGRAAASCFVSQPTLSTQIRKLEEELGLPLVERAPRKVMLTPA
GQEAAARARVIVSEVEQLKEAARRSRDPEAGTVRLGIFPTLGPYLLPHVIPRIRDRFPEL
ELLLVEEKSDVLLDRLREGKLDAALLALPVIDDQLHAEFLFEEPFLLAVSGRHPLARREH
LDVQELATQKLLLLEDGHCLRDQALEVCRLFGANEKSEFRATSLETLRQMVAADVGITLL
PSLSVQPPVPRSNNIRLLDFTGEGRPSRRIAMIWRRSSAMNDFLMELADQFKRLPQALFT
LEAVNTAGDTAALPGPALNG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaacctacgtgatctgaagtacctggtagccctggccgaccacaagcatttcggccgg
gctgccgcctcctgcttcgtcagccagcccacgctgtccacgcagatccgcaagctggaa
gaagagctgggcctgccgctggtggaacgcgcaccgcgcaaggtgatgctgaccccggcc
ggccaggaggctgccgcgcgggcgcgggtgatcgtgtccgaagtggaacagctgaaggaa
gcggcgcgacgcagccgcgacccggaagccggtacggtgcgcctggggatcttcccgacc
ctgggcccgtacctgctgccgcatgtgatcccgcgcatccgcgatcgcttcccggagctg
gaactgctgctggtcgaggaaaagagcgatgtgctgctcgaccgcctgcgcgaaggcaaa
ctcgatgctgcgctgctggccctgccggtgatcgacgaccagctgcacgccgagttcctg
ttcgaagaaccgttcctgctggctgtttccgggcgccacccgctggcccgccgcgagcac
ctggacgtgcaggaactggccacgcagaagctgctgctgctggaagacgggcattgcctg
cgcgaccaggcgctggaagtctgccgcctgttcggcgccaacgagaagtccgagttccgc
gccaccagcctggagacgctgcggcagatggttgccgccgacgtcggcatcaccctgctg
ccgagcctgtcggtgcaaccgccggtcccgcgctcgaacaacatccgcctgctcgatttc
accggcgaaggccgtcccagccgccgcatcgccatgatctggcgccgcagctcggccatg
aacgacttcctgatggagctggccgaccagttcaagcgcctgccgcaggcgctgttcacc
ctggaggcggtcaacaccgccggcgacactgccgccctgcccggccccgcgctgaacggc
tga
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