Stenotrophomonas geniculata: RKE57_03870
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Entry
RKE57_03870 CDS
T09411
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_03870
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
DUF748
DUF481
DUF3575
Autotransporter
DUF6089
SlipAM
TSP_3
Motif
Other DBs
NCBI-ProteinID:
WNF11294
LinkDB
All DBs
Position
839196..840287
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AA seq
363 aa
AA seq
DB search
MNKKILTAALLGGLAFAQAASAQEFDDRWYLTGSAGFNFQDSDRLTNDAPFVTLGLGKFI
SPNWSLDGELNYQNPNFDSNKDLNWSQYGVSLDLRRHFIKEGRGWNPYIVGGLGYQKSEE
EYPALNANGPRQRKDGNVAAKLGVGLQTTFEKRVAVRAEVAYRADFDDQSVAAPKEDWFG
DVLASVGVVIPLGPAPVAAAPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTIGPDG
CPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATEILKRYPDLRVEVAGHTDSKGTDAYNQ
KLSERRATAVYNYLTKNGVDAGRLVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELN
VQN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagatccttactgccgcgctgctgggcggcctggcttttgcccaggcagct
tcggcgcaggagttcgatgaccgctggtacctgaccggttcggccggcttcaacttccag
gacagcgaccgtctgaccaatgacgctccgttcgtgaccctgggcctgggcaagttcatc
agcccgaactggtcgctggacggtgagctgaactatcagaacccgaacttcgattcgaac
aaggacctgaactggtcgcagtacggcgtctcgctggacctgcgtcgccacttcatcaag
gaaggccgcggctggaacccgtacatcgtcggtggcctgggctaccagaagtcggaagaa
gagtacccggcgctgaatgccaatggtccgcgccagcgtaaggacggcaacgttgccgcc
aagctgggcgtcggcctgcagaccaccttcgaaaagcgcgttgctgtccgcgccgaagtg
gcctaccgcgctgacttcgacgaccagagcgttgccgctccgaaggaagactggttcggc
gacgtgctggcttcggtcggcgtcgtgatcccgctgggcccggctccggtcgcggctgct
ccggctccggctccggttgccccgagctgcgccgacctggacgacgacggtgacggcgtc
aacaactgcgacgacaagtgcccgaactcgcagccgggtcagaccatcggtccggacggt
tgcccggtgccggtctccatcgacctgaagggcgtcaacttcgacttcgacaagtcgaac
ctgcgtccggacgccgtggcgatcctgagcgaagccaccgagatcctgaagcgttacccg
gatctgcgcgttgaagttgccggtcacaccgactcgaagggtaccgacgcttacaaccag
aagctgtcggagcgtcgtgctaccgccgtgtacaactacctgaccaagaacggcgttgac
gccggtcgcctggtcggcccgatcggctacggtgagagccgtccgattgctccgaacacc
aacccggatggttcggacaacccggaaggtcgcgccaagaaccgtcgtaccgagctgaac
gtccagaactaa
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integrated database retrieval system
