Stenotrophomonas geniculata: RKE57_03880
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Entry
RKE57_03880 CDS
T09411
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgen03009
]
RKE57_03880
Enzymes [BR:
sgen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RKE57_03880
Ribosome biogenesis [BR:
sgen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RKE57_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WNF12620
LinkDB
All DBs
Position
841098..841844
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AA seq
248 aa
AA seq
DB search
MPAATAAGVRHGLARVLSKAGVCSRSEAARWIAEGRVRVSGRIVRDPEFPIGQPAPPIEV
DGQPMGAPQRLYLMLNKPRGVVTTAQDERGRDTVYRCFDGAGLPWIAPVGRLDKASEGLL
LFSNDPQWAARLTDPQTGPDKTYHVQVDRLPDDATLAALQAGVEDEGEFLVAQAVRVLRS
GDKTAWLEVVLDEGRNRHIRRLLAAFDLQVLRLVRVAIGGLQLGDLGKGQWRMLEVSDQQ
RLGAAAPG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
attcccgctgccacagccgccggtgtccgtcatggcctggcgcgcgtgctgtccaaggcc
ggcgtctgctcgcgcagcgaggccgcgcgctggatcgccgagggccgcgtacgcgtctcc
ggccgcatcgtgcgggatcccgagttcccgattggccagccggcgccgccgatcgaggtc
gatggccagccgatgggtgcgcctcagcgcctgtacctgatgctcaacaagccgcgcggg
gtggtgaccaccgcgcaggacgagcgtggccgcgacaccgtctaccgctgtttcgatggc
gccgggctgccgtggatcgcgccggtcgggcgcctggacaaggccagtgaaggcttgttg
ctgttcagcaacgatccgcagtgggcggcgcgcctgaccgacccgcagaccgggccggac
aagacctaccacgtgcaggtcgaccgcctgcccgatgacgccacgctggcggccctgcag
gccggcgtggaggacgagggtgagttcctcgttgcccaggccgtgcgcgtgctgcgcagc
ggcgacaagaccgcgtggctggaggtggtcctcgacgagggccgcaaccgccacatccgc
cgcctgttggcggccttcgacctgcaggtactgcgcctggtccgggtcgcgatcggcggg
ctgcagctcggcgatctcggcaaggggcaatggcggatgctggaggtcagtgaccagcag
cggctgggggccgctgcaccgggctga
DBGET
integrated database retrieval system
