Stenotrophomonas geniculata: RKE57_04235
Help
Entry
RKE57_04235 CDS
T09411
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03030
DNA replication
sgen03430
Mismatch repair
sgen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RKE57_04235 (dnaX)
03430 Mismatch repair
RKE57_04235 (dnaX)
03440 Homologous recombination
RKE57_04235 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgen03032
]
RKE57_04235 (dnaX)
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_04235 (dnaX)
Enzymes [BR:
sgen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RKE57_04235 (dnaX)
DNA replication proteins [BR:
sgen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RKE57_04235 (dnaX)
DNA repair and recombination proteins [BR:
sgen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RKE57_04235 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
AAA_18
PIF1
AAA_30
AAA_7
AAA_19
AAA_2
Mg_chelatase
nSTAND3
TsaE
AAA_24
Se-cys_synth_N
AAA_assoc_2
Glyco_tranf_2_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WNF11350
LinkDB
All DBs
Position
918438..920477
Genome browser
AA seq
679 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKY
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEEIEADGSAIVQLAKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVAAMLDALAEGDGPRLLQVVAALAEFSPDWSGVLEALAEGLHRIQVQQLVPG
AAAAAEGLDATVFAERLRPEVVQLWYQMALNGRRDLPLAPSPRAGFEMAVLRMLAFRPAA
AVPPVPKAVDGAVGGTPGGNAAGGGTGAGSHEATPAAAVASASPAVVAQVAAPAQAAPRE
PEPEPEPVPQPDPEPTPEPKPVPVEEPVSPPPVKAEAVAPPSVEAEAGDDLPPWATDEAE
ARDEALAAEMAGPDAAMVAPWHEPPAPVAAPGEPAPSERPFRTEGIAIAPTDSAPARDAV
PQEGVSELATAEDWLDLVANSGLSGPSRQLAANAAFISCQHGTLKLGLSPGFEYLRSERA
LAALGEMLEKALGQAPKIVVETVEIEHVPAETLHQRADRQRSERQQVAEAVFMDDPEVQV
LIQQHGARVVSDSIRSFDE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctcgtccttgcccgcaagtggcgtccgaagcgttttgccgagctggtgggc
caggaacacgtggtccgtgcgctcagcaacgcgctggacagcggccgggtccaccacgcg
ttcctgttcaccggtacccgcggcgtgggcaagaccaccatcgcgcgcatcttcgccaag
tcgctgaactgcgagcagggcaccagcgccgacccgtgcggccagtgcgcggcctgcctg
gacatcgacgccggccgctacatcgacctgctggaaatcgatgccgcgtccaacaccggt
gtggatgacgtgcgtgaggtgatcgagaacgcgcagtacatgccctcgcgtggcaagtac
aaggtctacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaagaaccgccggagcacgtgaagttcctgctggccaccaccgacccgcag
aagctgccggtcaccgtgctgagccgctgcctgcaattcaacctcaagcgcctggacgag
gatcagatccagggccagatgacgcgcatcctggcggcagaagagatcgaggccgacggc
agtgccatcgtacagctggccaaggccgctgacggtagcctgcgcgacggcctgtcgctg
cttgatcaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ctgggcacggtcgaccgcacccaggtggcggcgatgctcgatgcgctggccgagggcgat
ggtccgcgcctgctgcaggtggtggctgcgctggccgaattctcgccggactggagtggc
gtgctggaagcattggccgaaggcctgcatcgcatccaggtgcagcagctggtaccgggt
gccgcagcggccgctgaaggcctggacgcgacggtgttcgccgaacgcctgcgcccggaa
gtggtgcagctctggtaccagatggccttgaacggccgtcgtgacctgccgctggcgccg
agcccgcgcgcgggatttgaaatggccgtgcttcgcatgctggcgttccgaccggccgca
gcggtaccgccggtgccgaaggccgtcgacggtgcggtgggtggcacgccgggcggtaac
gctgccggtggtggcaccggtgccggtagccacgaagcgacgccggccgctgccgtcgct
tcggccagcccggccgtggtggcgcaggtggccgctccggcgcaggccgcgccgcgcgaa
cctgaacccgaaccggagccggtcccgcaacccgaccctgagccgacgccggagcccaag
ccggttccggtggaggagccggtgtcaccgccgccggtgaaggccgaagccgtggcgcct
ccgtctgttgaagcagaagcgggcgacgacctgccgccgtgggccaccgacgaagccgag
gcgcgtgacgaggcgctggcggccgagatggctgggccggacgcggccatggtggcgccc
tggcatgaaccgccggctcccgtcgcggctcccggcgagcctgcgccgtccgagcgcccg
ttccgcactgaaggcattgccatcgcgccaacagattcggccccggcacgtgatgccgtg
ccgcaggaaggcgtcagcgagctggccacggccgaggactggctcgacctggtggccaac
agtggcctgagcggcccgtcgcggcagctggcggccaacgctgccttcatcagttgccag
cacgggaccttgaaattgggcctttcgcccggatttgagtacctgcgctcggagcgtgcg
ctggcggccctgggcgagatgctggagaaagcccttggccaggcgccgaagatcgtggtc
gagaccgtggaaatcgagcacgttccggccgagaccctgcatcagcgtgccgaccgccag
cgtagtgagcggcagcaggtggcagaggctgttttcatggacgatccggaagtgcaggtg
ctgatccaacagcacggcgcccgggttgtttccgattccatccgttcttttgacgagtag
DBGET
integrated database retrieval system
