Stenotrophomonas geniculata: RKE57_04945
Help
Entry
RKE57_04945 CDS
T09411
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_04945
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_04945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WNF11486
LinkDB
All DBs
Position
complement(1050524..1052830)
Genome browser
AA seq
768 aa
AA seq
DB search
MTHITSRKHAPRVSLLATATLAAGFAPLAAQAADSADASSRNATDLDKVQVRGSWFNPSS
PKFTAELLDTPKSVSIVSEKLIAETGATNLQDALRMVPGITFGAGEGGNPTGDRPFIRGF
DSQSNVFVDGLRDVGSQTREIFDLEQVEVVKGPSSAYGGRDSGGGSLNLVSKTPKLKNET
SASMGIGTDSYARGTVDANYVLGDGIAARLNLMKHASDIAGRDAANVSRWGIAPSIAFGL
NGPAQLIASHYHMQSDDLPDAGGFPYNNPFTSGPNVAKNGDGRPMVPDRNNYYGLVDRDF
QRTRADISTLDASYDFGGHKLRNIARLGNTSNDYLWTQPDDSKGNPNNYGTLWRRTNSRA
VDVKSFADQLGLTGAFQTGALKHSYSAGVEYSDEKMTRGSYLMSPGTANPLENSANSTRC
QVSGAATGYNCTDFNNPNPNDPWAAGQIVYRSDKALDVEQRTKTTSAYVFDTIELNEQWM
INLGLRYDDFRTTLTTPVAGKAPTRVRNSNDFLNYQAGVVFKPATNGSIYLSWGTSSTPP
GMDGGDGSDGLSAAVADLKPQDTKNLELGTKWDLLDNRLNLTAAIFHTVMNNARVTVDNG
TSQNAGKKEINGFELGFNGQLTDAWSLYGGYTYLDSELKDNGFVCGAPVGRTCPSNVYVP
SPNNGNVFPNTAKHSANLWTTYRFPIGLTIGAGAFYSDKQYGDVANTKWIASYTRFDAMA
SYAIQDNISLQLNVQNLTDKTYFTKAYASHYASIAPGRSATLALNVKF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgacccacatcacgtcccgcaagcacgccccgcgcgtttccctgctcgctaccgccacc
ctggccgccggcttcgcaccgctggccgcacaggccgccgacagcgccgatgccagctcc
cgcaacgccaccgacctggacaaggtgcaggtgcgcggcagctggttcaatccgtcctcg
ccgaagttcaccgccgagctgctggacaccccgaagtcggtgtcgatcgtgtcggaaaag
ctgatcgccgaaaccggtgcgaccaacctgcaggatgcgctgcgcatggtcccgggtatc
accttcggtgccggcgaaggcggcaacccgaccggtgaccgccccttcatccgtggcttc
gattcgcagagcaacgtcttcgtcgacggcctgcgcgacgtcggctcgcagacccgcgag
atcttcgacctggagcaggtggaagtggtcaagggaccgagttcggcctacggcggccgt
gactccggtggtggcagcctgaacctggtgagcaagacgccgaagctgaagaacgagacc
agcgccagcatgggcatcggcaccgacagctacgcgcgcggcaccgtggacgccaactac
gtgctgggcgatggcatcgccgcccgcctgaacctgatgaagcacgcgtcggacatcgcc
ggtcgtgatgcggccaatgtcagccgctggggcatcgcgccgtcgatcgcgttcggcctg
aacggcccggcgcagctgatcgccagccactaccacatgcagagcgatgacctgccggac
gcgggtggtttcccgtacaacaacccgttcaccagcggcccgaacgtggccaagaacggc
gacggccgcccgatggtgccggaccgcaacaactactacggcctggtcgaccgtgatttc
cagcgtacccgcgccgatatcagcaccctggacgccagctacgatttcggcggccacaag
ctgcgcaacatcgcgcgcctgggcaacaccagcaacgactacctgtggacccagccggac
gacagcaagggcaacccgaacaattacggcaccttgtggcgccgtaccaacagccgcgcc
gtcgacgtcaagagcttcgccgaccagctgggcctgaccggcgccttccagaccggcgcg
ctcaagcacagctacagcgcgggcgtggagtacagcgacgagaagatgacccgcggcagc
tacctgatgtcgccgggcaccgccaatccccttgaaaacagcgccaacagcactcgctgc
caggtgtccggcgcggccaccggctacaactgcaccgacttcaacaatccgaacccgaac
gatccgtgggcggccggtcagatcgtctatcgcagcgacaaggcgctggacgtcgagcag
cgcaccaagaccacctcggcctacgtgttcgacaccatcgagctcaatgagcagtggatg
atcaacctcggcctgcgctacgacgacttccgtaccaccctgaccactccggtggccggc
aaggcaccgacccgcgtgcgcaacagcaacgacttcctgaactaccaggccggcgtcgtg
ttcaagccggccaccaacggcagcatctacctgtcctggggcacctcctcgaccccgccg
ggcatggacggtggtgacggttcggacggcctgagcgcggccgttgccgacctcaagccg
caggacacgaagaacctcgaactgggcaccaagtgggacctgctggacaaccgcctgaac
ctgactgctgcgatcttccacaccgtgatgaacaacgcgcgcgtgaccgtcgacaacggc
accagccagaacgccggcaagaaagagatcaacggtttcgagctgggcttcaacggccag
ttgaccgacgcctggagcctgtacggcggctacacctacctcgattccgagctgaaggac
aatggctttgtctgtggcgcaccggtgggccgcacctgcccgtccaacgtctacgtgccg
tcgccgaacaacggcaacgtgttcccgaacaccgccaagcacagcgccaacctgtggacc
acctaccgcttcccgatcggcctgaccatcggcgctggtgcgttctactcggacaagcag
tacggtgatgtggccaacaccaagtggattgccagctacacccgcttcgacgcgatggcc
agctacgcgatccaggacaacatcagcctgcagctcaacgtgcagaacctgaccgacaag
acctacttcaccaaggcctatgcctcgcactacgcgagcatcgccccgggtcgctcggcc
accctggcactgaacgtgaagttctga
DBGET
integrated database retrieval system
