Stenotrophomonas geniculata: RKE57_05055
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Entry
RKE57_05055 CDS
T09411
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00550
Peptidoglycan biosynthesis
sgen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RKE57_05055 (murD)
Enzymes [BR:
sgen01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
RKE57_05055 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WNF11508
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All DBs
Position
1077205..1078614
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AA seq
469 aa
AA seq
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MKISKLEGKRVALWGWGREGRAAFAVLRARLPTLGLSLFCPAAEAEAARAETQGALDVRG
EPSAEALAAFDVVIKSPGISPYQPIALAAAEQGTTFIGGTALWFAEHAADDGIVHDTVCV
TGTKGKSTTTALVAHLLRAAGHRTGLVGNIGLPLLEVLDPQPAPEYWAVELSSYQTGEVA
RSGAHPQVAVVLNLFPEHLDWHGSEQRYIEDKLRLVTEAAPRIAVLNAADPHLAALSLPD
SEVVWFNQPQGWHMRGDIVHRGEQAVFDTRNTPLPGRHNRGNLCAVLAALEALGLDAVAL
APAVQDFRPLPNRLQRIGVADGLTYVNDSISTTPHASLAALECFAGQRIALLVGGHDRGL
DWTDFLQHMAHDVPPVEIVTMGSNGPRIHAMLQPLADAGRFGLHAAGDLSEAMALARAAL
GGQGGVVLLSPGAPSFGAYRDYVARGRHFAELAGFDPESISAIPGLGIA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatttcgaagcttgagggaaagcgcgttgcgctgtggggctggggccgcgagggt
cgcgccgcgtttgcggtactacgcgcgcgcctgccaacgcttggcctgagcctgttctgc
ccggccgctgaagccgaagccgcgcgtgcggaaacgcagggcgcgctggacgtgcgtggc
gaaccctcggccgaagcgctggccgcgttcgacgtggtgatcaagtcgcccggcatcagc
ccttaccagccgatcgcgctggcggcggcagagcagggcaccaccttcatcggcggcacc
gcgttgtggtttgccgaacacgcggccgacgacggcatcgtgcacgacaccgtgtgcgtg
accggtaccaagggcaagagcaccaccaccgccttggtcgcgcacctgctgcgtgccgcc
ggtcatcgtaccggcctggtcggcaacatcggcctgccgctgctggaagtgctggatccg
cagccggcacccgagtattgggcggtggaactgtccagttaccagaccggtgaagtggcg
cgcagtggcgctcatccgcaggtggcggtggtactgaacctgttccccgaacacctggac
tggcacggcagcgaacaacgttacatcgaagacaagctgcggctggtgactgaagctgcg
ccgcgcatcgccgtgctcaatgccgccgatccgcacctggcggcactgtcgctgcccgat
agtgaggtggtctggttcaaccagccgcagggctggcatatgcggggcgacatcgtgcat
cgcggcgaacaggcggtgttcgatacccgcaacacgccgctgccgggccgccacaaccgc
ggcaacctgtgcgcggtgctggctgcactggaagcgctgggcctggacgcggtggcgctg
gcaccggcggtgcaggatttccgcccgctgccgaatcgcctgcagcggattggcgtggcc
gatggcctgacctacgtcaacgattcgatcagcaccacgccgcatgccagcctggctgcg
ctggagtgcttcgccgggcagcgcatcgcgctgctggtgggcgggcacgaccgtggcctg
gactggaccgacttcctgcagcacatggcgcacgatgtgccgccggtggagatcgtgacc
atgggcagcaacggcccgcgcatccacgcgatgctgcagccgctggccgacgccggccgc
ttcggcctgcacgccgccggcgacctgtccgaggcgatggcgcttgcacgcgcggcgctg
ggcgggcagggtggggtggtgctgctgtcgccgggtgccccgagtttcggtgcctatcgc
gattacgtggcgcgtggccgccattttgccgagctggccggtttcgacccggagagcatc
agcgcgattcccgggctgggtatcgcttga
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