Stenotrophomonas geniculata: RKE57_05380
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Entry
RKE57_05380 CDS
T09411
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_05380
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_05380
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF3370
Motif
Other DBs
NCBI-ProteinID:
WNF11569
LinkDB
All DBs
Position
complement(1160418..1162610)
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AA seq
730 aa
AA seq
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MSLTLRNRLPRRALLPAALLSSLSLLAAPSAFAAADGAADAKTLDRVSVRAEQSAPPSST
TRLPITLQETPQSATAISLKRLQDESLFSINDVMRNVTGVSVSFYDTQRPLYYARGFAIT
DFQVDGIPTYSGSTNQEYDTAFYDRIEVIRGANGLLSGAGVPSATVNLLRKRPGKEFDAS
FAVSAGSWDYRRMEADVTAPLTDDGRFRSRVVAAYTDRGLYYDRYDENKMAGMAVLEGDV
TDSTTITLGYQSQDNNPTGSTWGTVPFFDNQGNFAHLPRSTNLSPKWSYWKRESNTAFAN
LEQRFGDNWLLKINTAYTRGNVQNVRLYGTGNPDPVTGSGIFLRAAAGDSKDTRRNVDAY
LSGSFDLFGREHDLTVGAQWSDLEGTTNTLALNYPTDWARCGSERCYYIPNVYSWNGDIS
EVTYRRTGARRVARTTQSGVYLATRLRLADPLSLIAGARLSRWETLSRSYNAAGAYTGTS
GAYKVSDEVTPYVGLVYDITPNVSAYASYTEIFNPQNFKDRNENLLAPVQGSNLEAGIKT
QWLDGRLTANAAVFEAKQDNYAVRDMGVPEGSLSDGTSAYVGVNGTKARGWEMDVNGEIL
PGWTVNVGYTHVKVTRAATDLLYANPPKDLLQLNTQLQLRGALERLSVGGGLQWQSKVQG
YNIAYPLGGTVTVNQPAYMLVQFNANYRISDSWTATLSVRNALDKTYWANLDYNNYGEPR
FVSASLRWKF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaccctgcgtaaccgcctgccccgccgcgcgctgctgccggctgccctgctt
tcgtcgctgtccctgctggccgcgcccagcgcgttcgccgccgccgatggcgccgccgat
gccaagaccctggaccgggtcagcgtccgtgccgagcagtccgctccgccatccagcacc
acccgcctgccgatcacgctgcaggaaaccccgcagtcagccacggcgatcagcctcaag
cgcctgcaggacgaatcactgttcagcatcaacgatgtgatgcgcaacgtcaccggcgtc
agcgtgtccttctatgacacccagcgcccgctgtactacgcgcgtggctttgccatcacc
gacttccaggtcgatggcattcccacctacagcggctccaccaaccaggaatacgacacc
gccttctacgaccgcatcgaagtgatccgcggcgccaacggcctgctcagtggcgccggc
gtgccgtcggccacggtcaacctgctgcgcaagcgcccgggcaaggagttcgatgcctcg
ttcgcggtcagcgccggcagttgggactaccgccgaatggaagccgacgtgaccgcaccg
ctgaccgatgacggccgtttccgcagccgcgtggtcgccgcctataccgatcggggcctg
tattacgaccgctacgacgagaacaagatggccggcatggcggtgctggaaggcgacgtc
accgacagcaccacgatcaccctcggttaccagagccaggataacaaccccaccggttca
acctggggcaccgtgccgttcttcgacaaccagggcaacttcgcccacctgccgcgttcg
accaacctgtcgccgaagtggagctactggaagcgcgagagcaacaccgcgttcgccaac
ctggaacagcgcttcggtgacaactggctgctgaagatcaacaccgcctacacccgtggc
aacgtgcagaacgtgcgcctgtacggcaccggcaacccggacccggtgaccggctcgggc
atcttcctgcgcgcggccgccggcgattccaaggacacccgtcgcaatgtcgatgcctac
ctgtccggcagcttcgacctgttcggtcgcgagcacgacctcaccgttggcgcgcagtgg
tcggacctggaaggcacgacgaataccctcgcgctgaactacccgaccgactgggcgcgc
tgtggcagcgaacgctgctactacatccccaatgtgtacagctggaacggcgacatctcc
gaagtgacctaccgccgcaccggcgcgcgccgcgtggccaggaccacgcagagtggtgtc
tacctggccacccgcctgcgcctggccgatccgctgtcgctgattgcaggcgcgcgcctg
agccgctgggaaaccctcagccgctcgtacaacgccgcaggcgcctacaccggcaccagc
ggcgcctacaaggtgagcgatgaagttactccctacgtgggcctggtctacgacatcacc
ccgaacgtgtcggcctatgccagctacaccgagatcttcaacccgcagaacttcaaggac
cgcaacgagaacctgctggcaccggtgcagggttcgaacctggaagcaggcatcaagacc
cagtggctggatggccgcctgaccgccaatgccgccgtgttcgaggccaagcaggacaac
tatgcggtgcgcgacatgggcgtgccggaaggttcgctcagcgatggcacctccgcctac
gtcggcgtcaacggcaccaaggcgcgcggctgggagatggacgtcaacggcgagatcctg
ccgggctggacggtcaatgtcggctacacccacgtcaaggtcacccgagcggctaccgac
ctgctgtacgccaatccgccgaaggatctgttgcagctcaacacccagctgcagctgcgc
ggcgcgctggaacgcctgagcgttggcggcggcctgcagtggcagagcaaggtgcagggc
tacaacatcgcctacccgctgggcggcacggtcacggtgaaccagccggcctacatgctg
gtgcagttcaatgccaactaccgcatcagcgacagctggaccgcaacgctgagcgtgcgc
aacgcactggacaagacctactgggccaacctggactacaacaactacggcgaaccacgc
ttcgtgtcggccagcctgcgctggaagttctga
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