Stenotrophomonas geniculata: RKE57_05705
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Entry
RKE57_05705 CDS
T09411
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_05705 (radA)
DNA repair and recombination proteins [BR:
sgen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RKE57_05705 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
GvpD_P-loop
AAA_22
AAA_16
Lon_C
SLFN-g3_helicase
nSTAND_NTPase5
AAA_24
AAA_30
nSTAND3
AAA
AAA_33
PAXNEB
Zn_ribbon_8
RecA_N
Rad51
zf-C2H2_6
NACHT
NTPase_1
AAA_14
MCM
DAP3
GvpD_bR2
Motif
Other DBs
NCBI-ProteinID:
WNF11632
LinkDB
All DBs
Position
1232623..1233999
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AA seq
458 aa
AA seq
DB search
MAKARTAYVCNECGAEFSKWQGQCTECNAWNSLSEIVLESAAAAKAPASRRAGWAGKIDP
PKITALKDVEQTEHRRVSTGIGEFDRVLGGGLVEGAVVLVGGDPGIGKSTLLLQAVAKMA
AELPVLYVTGEESLAQVAGRAHRLELPLDGVNALAETGVESILQHASRAGPRLIVADSVQ
TLWTESLTAAPGSVSQVRESAARLVRFAKETGTAVFLVGHVTKEGGIAGPRVLEHMVDAV
LYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGDKGLKEVSNPSAIFLSGGSTHQPGSCV
MVTREGTRPLLVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGVLVGDQDVFV
NVVGGIRVQETAADLPVLLAVLSSLQDRPLAEKTIAFGEVGLSGEIRPVPNGEDRLREAA
THGFKRAIVPKANAPKGGSVKGMEVIAVERLSEAIDAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcccgcaccgcctacgtctgcaatgaatgcggcgccgaattcagcaagtgg
cagggccagtgcaccgagtgcaacgcctggaactcgctgtcggaaatcgtgctggagagc
gcggcggcggccaaggcgccggcgtcgcgccgggccggctgggcgggcaagatcgacccg
ccgaagatcaccgcgctgaaggacgtggagcagaccgagcaccgccgggtcagcaccggc
atcggcgagttcgaccgcgtgctcggcggcggcctggtcgaaggcgcggtggtgctggtc
ggtggcgaccccggcatcggcaagtcgaccctgctgctgcaggcggtggcgaagatggcg
gctgaattgccggtgctgtacgtcaccggcgaggagtcgctggcgcaggtggctggccgc
gcgcatcgcctggagctgccgctggatggcgtcaatgcgctggccgagaccggcgtcgag
tcgatcctgcagcatgcctccagggctggaccgcggctgatcgtggccgattccgtgcag
accctgtggaccgagagcctgaccgccgcgccgggctcggtcagccaggtacgcgagagt
gctgcgcggctggtgcgcttcgccaaggaaaccggcaccgccgtgttcctggtcggtcac
gtgaccaaggagggcggcatcgccggcccgcgcgtgctcgaacacatggtcgatgcggtg
ctgtatttcgaaggcgagagcggcagccgcttccgcctgctgcgcgccttcaagaaccgc
ttcggtgcagtcaacgagctgggcgtgttcgcgatgggcgacaagggcctgaaggaggtc
tccaacccatcggcgatcttcctgtccggtggcagcacccatcaaccgggcagttgcgtg
atggtcacccgcgagggcacccggccgctgctggtggaggtgcaggcgctggttgatgcg
tcgccgctgtcgaacccgcgccgtgtcgcggttggcctggagcagaaccggctggccatg
ctgctggcggtgctgcatcgccacggcggtgtgctggtcggcgatcaggatgtgttcgtc
aacgtggtcgggggcatccgcgtgcaggagaccgcggccgacctgccggtactgctggcc
gtactgtcctcgttgcaggaccgcccgctggcggagaagacgattgctttcggcgaagtc
ggcctgtccggcgagatccgcccggtgcccaatggcgaagaccgcctgcgcgaggcggcc
acccatggcttcaagcgcgccatcgtgcccaaggccaatgcgccgaagggcggttcggtg
aaaggcatggaagtgatcgcggtggagcgcctgtccgaggccatcgacgcggcgtga
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