Stenotrophomonas geniculata: RKE57_06235
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Entry
RKE57_06235 CDS
T09411
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00540
Lipopolysaccharide biosynthesis
sgen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RKE57_06235
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgen01005
]
RKE57_06235
Enzymes [BR:
sgen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
RKE57_06235
Lipopolysaccharide biosynthesis proteins [BR:
sgen01005
]
Core region
RKE57_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
MSP1a
Anthrone_oxy
Motif
Other DBs
NCBI-ProteinID:
WNF11734
LinkDB
All DBs
Position
1346832..1348109
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AA seq
425 aa
AA seq
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MTAACMAAEPRYTWRTVLLSILVAIVPLAGSAPYTLLKAVLLLALLVTGVVLIRRQPDVR
LRYRIARFIVIVCFLRLAYAFYSILWHGLRWNELDLPAQTLLYLGTAAVFATALDWRLIW
KIFALSTLVFGGSCIVQHHVMGLERAHGFSGGEWTAIEFTMVTLCMALFSVIRLIQPNVH
PAERWLHGVAIAVGVYGSILAQSRGPILAFIPAMLMVIAVHVRRTRRWRGALAFVGALVI
GVVGATSVLNHEVIQRFGEVSGEISGFNQENEVGSVRERIAMWGVAVDAFAEHPVAGVGL
NQFGTYAREGIARGEVSESIFRYNHPHNEYLEAAVTGGVPLLLIMLLVFILPGIHFVRRL
GHADDITAMIATAGLAVVIVYALSAFTDNVFYRAMPHSFYFYLVLGFMLATALPARDLLR
PGSPS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagcctgcatggccgccgaacctcgttacacctggcgtaccgtcctgctgagc
atcctggtcgccatcgttccgcttgccggctccgcaccctacaccttgctgaaggcggtg
ctgctgctggccctgctggtcaccggcgtggttctgatccgccgccagcccgatgtccgc
ctgcgctaccgcatcgcccggttcatcgtgatcgtctgcttcctgcgcctggcctatgcc
ttctacagcatcctctggcacgggctgcgctggaacgaactggaccttccggcacagaca
ctgctctacctgggcaccgctgcggtgttcgccactgcgctggactggcgcctgatctgg
aagatcttcgccctgtccaccctcgtcttcggcgggtcgtgcatcgtgcagcaccacgtg
atgggccttgaacgcgcgcacggtttcagtggcggcgaatggaccgccatcgagttcacc
atggtgacgctgtgcatggcgctgttctcggtcatccggttgatccagcccaatgtccat
ccggccgaacgctggctgcacggcgtggccatcgccgtcggcgtctatggttcgatcctg
gcgcagagccgcgggccgatcctggcgttcattcccgccatgctgatggtgattgcggtg
cacgtccggcgcacccggcgctggcggggggcactggccttcgtcggtgccctggtcatt
ggcgtggtcggcgccacctcggtgctgaaccatgaggtgatccagcgcttcggtgaggtc
agcggcgagatctccggtttcaaccaggaaaacgaggtcggctcggtccgcgagcgcatc
gccatgtggggcgtggccgtcgacgccttcgccgagcatcccgtggcgggggtgggcctg
aaccagttcggtacctatgcacgtgagggcatcgcccgcggcgaggtgtccgagtcgatc
ttccgctacaaccacccacacaacgagtacctggaagcggcggtgaccggtggcgtgccg
ttgctgctgatcatgctgctggtcttcatcctgcccggcatccatttcgtgcgacgtctc
ggccacgccgacgacatcaccgcgatgatcgccaccgccggacttgccgtggtcatcgtc
tatgcgctttcggcgttcacggacaacgtgttctaccgggcgatgccgcattcgttctat
ttctacctggtgctgggtttcatgctggcgaccgccttgccggcgcgtgacctgctccgg
ccagggagtccttcctga
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