Stenotrophomonas geniculata: RKE57_07245
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Entry
RKE57_07245 CDS
T09411
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgen03016
]
RKE57_07245 (miaB)
Enzymes [BR:
sgen01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RKE57_07245 (miaB)
Transfer RNA biogenesis [BR:
sgen03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RKE57_07245 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
WNF11927
LinkDB
All DBs
Position
complement(1574120..1575538)
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AA seq
472 aa
AA seq
DB search
MTGTPDVFPPATPGGTPLVALPAGPRKPDQVKGKLYIKTHGCQMNEYDSAKMADVLAASD
GLELTDTPDDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGE
AIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFPEIEKFDRLPEPRADGASAF
VSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPY
GDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLVDAFRDVPQLANFLHLPVQAGS
DRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGF
DHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAASISQKMVGTVQTVLVE
GPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARVVAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgccagacgtctttccgcccgccacaccgggcggtaccccgctcgttgcc
ctgcccgctggtccgcgcaagcccgaccaggtcaagggcaagctgtacatcaagacccac
ggttgccagatgaacgagtacgactcggccaagatggccgacgtgcttgccgccagcgat
ggcctggaactgaccgataccccggacgacgctgacgtcatcctggtcaacacctgctcc
atccgcgagaaggcgcaggagaaggtattcagccagctgggcgtgtggaagggcctgaag
aacaagggccgcgaggtcatcatcggcgtcggcggctgcgttgcctcgcaggaaggcgaa
gcgatcatcaagcgcgcgccgttcgtcgacctggtgttcggaccgcagaccctgcaccgc
ctgccggaactgatccgcgcgcggcgcgaacagaagcgcccgcaggtggacatcagcttc
cccgagatcgagaagttcgaccgcctgccggagccacgtgccgatggcgcctcggcgttc
gtgtcgatcatggaaggctgctcgaagtactgctcgttctgcgtggtgccctacacccgc
ggcacggaggtcagccgcccgttcgaggacgtggtggtggaagtggcccagctggccgcg
cagggcgtgcgcgagatcaacctgctcggccagaacgtcaacgcctaccgtggcccgtat
ggcgatggtgagttcgccgacctgggcctgctgatccgcaccatcgccgagatcgatggc
gttggccgcatccgcttcaccacctcgcacccgctggagttcagcgattcgctggtcgat
gcgttccgcgacgtaccgcagctggccaacttcctgcacctgccggtgcaggccggcagc
gaccgcgtgctgtcggcgatgaagcgcggctacaccgcactggaattcaagtcgaagatc
cgcaagctgcgcgcggtgcgcccggacatctcgatcagctcggacttcatcgtcggcttc
cccggcgagaccgatgccgatttcgagaagaccatgaagctgatcgaagacatcggcttc
gaccacagcttctccttcatctattcgcgccgcccgggcacgccagcggccgacctggag
gacacgatcagcgatgccgaaaagcacgcgcgcctgtcgcgcctgcaggagcgcatcaat
gcgcacgcggccagcatctcccagaagatggtgggcacggtgcagaccgtgctggtggaa
ggtccgtcgcgcaagaatccgaacgagctgaccggcaagaccgagaacatgcgctcggtg
aacttcccggcgccggcacggctgatcggccagttcgtggatgtggtgatcaccgaagcg
ctgaccaattcgctgcgcgcgcgggtggtggcggagtaa
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