Stenotrophomonas geniculata: RKE57_07810
Help
Entry
RKE57_07810 CDS
T09411
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgen03016
]
RKE57_07810 (truD)
Enzymes [BR:
sgen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
RKE57_07810 (truD)
Transfer RNA biogenesis [BR:
sgen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RKE57_07810 (truD)
Prokaryotic type
RKE57_07810 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WNF12030
LinkDB
All DBs
Position
1674689..1675720
Genome browser
AA seq
343 aa
AA seq
DB search
MIPLPLAFGAPLLTARIRTTPDDFQVDELPAFEATGEGEHLLLHIRKRGANTVHVAKVLA
KWAGLPEMAVSYAGMKDRHAVTTQRFSVHLPKRIAPDLAELASDEIEVLDATWHNRKLQR
GALAGNRFKLVLREVQGDAAAISERLQQVAERGLPNWFGEQRFGRDGGNVPAALAMFGGR
RMRKDQRSLLLSAARSALFNRVLAARVEQGNWDQPLEGEVWMLDGSRSVFGPEPYTDVLA
ERLARFDIHPSAPLWGEGELRSTDAARELELAALDDEESKALRAGLEDARLKQERRALRL
RPALLQHQWLADDVLELSFALPPGCYATAVLHELGPVEDASQA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattccgctgccgcttgcattcggtgcgccattgctcacagcgcgcatccgcaccacg
ccggacgatttccaggtcgacgagctgccggccttcgaggccaccggcgaaggtgagcac
ctgctgctgcatatccgcaagcgcggcgcgaacaccgtgcatgtggccaaggtgctggcc
aagtgggccggcctgccggaaatggcggtcagctacgccggcatgaaggatcgccacgcg
gtcaccacccagcgtttcagcgtgcacctgcccaagcgcattgcgccggacctggccgag
ttggccagtgatgagatcgaagtgctcgacgcgacctggcataaccgcaagctgcagcgt
ggcgcactggccggcaaccgtttcaagctggtgttgcgtgaagtgcagggcgatgccgca
gcgatcagcgaacgcctgcagcaggttgccgagcgcggcctgccgaactggttcggcgag
cagcgctttggccgcgacggcggcaacgtgccggcggcactggcgatgttcggtggccgc
cgcatgcgcaaggatcagcgttcgttgctgctgtcagccgcgcgttcggcgctgttcaac
cgcgtgctggccgcgcgcgtggagcagggcaactgggatcagccgctggagggcgaagtg
tggatgctcgatggcagccgcagcgtgttcggacccgagccgtacaccgacgtgctggcc
gagcgcctggcgcgtttcgacatccatcccagcgcgccgctgtggggcgaaggcgagctg
cgcagcaccgatgcggcacgcgagctggagctggccgcgctggacgacgaagagtcgaag
gcactgcgggccggcctggaagacgcgcgcctgaagcaggagcgccgcgcgctgcgcctg
cgcccggcgctgctgcagcaccaatggctggccgatgacgtgctggagttgtcgttcgcg
ctgccgccgggctgctacgccaccgccgtgctgcacgagctcggcccggtcgaagacgcc
tcgcaggcctga
DBGET
integrated database retrieval system
