Stenotrophomonas geniculata: RKE57_08130
Help
Entry
RKE57_08130 CDS
T09411
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RKE57_08130 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgen03019
]
RKE57_08130 (pcnB)
Enzymes [BR:
sgen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RKE57_08130 (pcnB)
Messenger RNA biogenesis [BR:
sgen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RKE57_08130 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF6448
Motif
Other DBs
NCBI-ProteinID:
WNF12644
LinkDB
All DBs
Position
1744968..1746341
Genome browser
AA seq
457 aa
AA seq
DB search
MGNPETSTGSANIISSATSPFSLRVIPRDQHTISRKDISPNALRVLYRLRDAGFGAYLVG
GAVRDLLVNGQPKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
SDDGSGDREMENGMLVRDNVYGTIEDDAIRRDFTCNALYYAIEDFSVRDYTGGFEDVQAR
LMKLIGDPEQRYREDPVRMLRAVRLAAKLGFQIEEGTAAPIPHLAGLLNEAAPARLFEEV
LKLFLSGHGVASFEGLERYGLLDVLFPESAKALKSNRTGALRRMLVEGLANTDARVANDE
PVSPAFLFALLLWPAFCRAQATLLKQGVAPEEAQRRAADRVTVQQLSTIALPRRFSLPMQ
EIWLLQSRFSSRQRKRVFRTLTHPRFRAAFDFLSLRQVASSEHAVDVEFWREAQAQSGRE
LESSLDAMHSEDGDDENGAPRKRRRRRRRPGAAAAGE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaatcccgaaacttcaaccggaagcgccaacatcatttcctctgctacatcaccg
ttcagcctgcgcgtcatcccgcgcgaccagcacacgatctcccgcaaggacatcagcccg
aacgccctgcgcgtgctttatcgcctgcgcgatgccggcttcggcgcctaccttgtcggc
ggcgcggtgcgcgatctgctggtcaatggccaacccaaggatttcgacgtggccaccgat
gccacgcccgaacaggtcaagcagctgttccgcaactgccgcctgatcggtcgtcggttc
cgcctcgcccacgtcgtgttcggccgcgagatcatcgaagtcgccaccttccgtgccaac
agcgatgacggcagcggcgaccgcgagatggaaaacggcatgctcgtgcgcgacaacgtg
tacggcaccatcgaagacgacgccatccgccgcgacttcacctgcaacgccctgtactac
gccatcgaggacttctcggtgcgtgattacaccggcggcttcgaagacgtccaggcgcgc
ctgatgaaactgatcggcgaccccgagcagcgttatcgcgaagacccggtgcgcatgctg
cgtgcggtgcgcctggcggccaagctcggcttccagatcgaagagggcaccgccgcgccg
atcccgcacctggctggcctgctcaacgaagccgcaccggcacgcctgttcgaggaggtg
ctcaagctgttcctgtccgggcacggcgtggccagcttcgaaggccttgagcgttacggc
ctgctcgacgtgctgttcccggaaagcgccaaagcattgaagtccaaccgcaccggtgcg
ctgcgccgcatgctggtcgagggcctggccaacaccgatgcgcgcgtggccaacgacgag
ccggtctcgccggcgttcctgttcgcgctgctgctgtggccggcgttctgccgcgcgcag
gcgaccctgctcaagcagggcgtggcaccggaggaggcacagcgccgtgctgccgaccgt
gtgaccgtgcagcagctgagcaccatcgcattgccgcgccgcttttcgctgccgatgcag
gaaatctggctgctgcagtcgcgcttcagttcgcgccagcgcaagcgcgtgttccgtacc
ctgacccacccgcgcttccgcgccgcgttcgatttcctcagcctgcgccaggtcgcttcg
tccgagcatgcagtggatgtcgagttctggcgcgaagcacaggcgcagtccggtcgcgag
ctggagtcgtcgctggatgcgatgcacagtgaagacggcgatgacgagaacggggcaccg
cgcaagcgccgccgtcggcgtcgacgtcccggtgctgctgcggcgggcgagtaa
DBGET
integrated database retrieval system
