Stenotrophomonas geniculata: RKE57_08250
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Entry
RKE57_08250 CDS
T09411
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00020
Citrate cycle (TCA cycle)
sgen00190
Oxidative phosphorylation
sgen00650
Butanoate metabolism
sgen00720
Other carbon fixation pathways
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01120
Microbial metabolism in diverse environments
sgen01200
Carbon metabolism
Module
sgen_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sgen_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sgen_M00149
Succinate dehydrogenase, prokaryotes
sgen_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RKE57_08250 (sdhA)
00650 Butanoate metabolism
RKE57_08250 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RKE57_08250 (sdhA)
00720 Other carbon fixation pathways
RKE57_08250 (sdhA)
Enzymes [BR:
sgen01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RKE57_08250 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Thi4
Pyr_redox_2
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WNF12110
LinkDB
All DBs
Position
1769106..1770896
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
ANMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQR
PFGGMTTKYGEGPAAQRTCAAADRTGHAMLHTLYQQSLKHDARFMIEYFALDLIFDEEGA
CRGVLALDMSDGTLHLFRAQGVVLATGGYGRAYFSATSAHTCTGDGGGLAMRAGIAMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDDKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVQKVGDNDNAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETIKPGASHKPLASDACDKALGLLDKLRHANGDTPTSVIRDRMQRTMQADAAVFRTS
QTLKEGCEKMDKIFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVSVDEKGKCSFDYRPVHMYTLTDDVSVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcaccgaacacaagtacgacatggtcgtggtcggcgccggcggc
gccggcctgcgcgccacgttcggcctggccgccaagggcctgcagaccgtgtgcctgacc
aaggtcttcccgacccgttcgcacaccgttgccgcccagggcggtatctcggccgcactc
gccaacatgggcgaggacgactggcgttaccacttcttcgataccatcaaggggtcggac
tggctgggcgaccaggacgccatcgaatacatgtgccgtgaggccatcccggccatcatc
gagctcgaacactacggcgtgccgttctcgcgcaccgccgaaggcaagatctaccagcgt
ccgttcggtggcatgaccaccaagtacggtgaaggcccggcggcgcagcgtacctgcgcg
gcggccgaccgtaccggtcatgcgatgctgcacaccctgtaccagcagtcgctgaagcac
gacgcgcgcttcatgatcgagtacttcgcgctcgacctgatcttcgacgaggaaggcgcc
tgccgcggcgtgctggccctggacatgtccgatggcacgctgcacctgttccgcgcccag
ggcgtggtgctggccaccggcggctacggccgtgcctacttcagcgccacgtcggcgcat
acctgcaccggcgacggtggcggcctggccatgcgtgccggcatcgccatgcaggacatg
gagttcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgagggt
gtccgcggtgaaggtggcatcctgcgcaacagcagtggcgagcgcttcatggagcgctat
gcaccgcactacaaggatctggcctcgcgcgacgtggtcagccgttcgatgaccatcgag
atccgcgaaggccgcggcgtcggcgagcacaaggatcacatcctgctcgacctgacccac
ctcggcccgggcgtgatcgacgacaagctgccgggcatcgccgaaagcgcccgcatcttc
gccggcgtcgacgtgcacaagcagccgatcccggtcatcccgaccgtgcactacaacatg
ggcggcatcccgaccaactaccacggcgaagtggtgcagaaggtcggcgacaacgacaat
gccgtagtgccgggcctgtacgcgatcggtgaagcggcctgcgtctccgtgcacggcgcc
aaccgactgggttcgaactcgctgctggacctggtggtgttcggtcgtgcggtcgccaac
cgctgcgccgagaccatcaagccgggcgcatcgcacaagccgctggcgtctgatgcctgc
gacaaggcgctgggcctgctggacaagctgcgccacgccaacggcgataccccgacctcg
gtcatccgcgatcgcatgcagcgcaccatgcaggccgatgccgccgtcttccgcaccagc
cagacgctgaaggaaggctgcgagaagatggacaagatcttcgattcgttccaggacgtg
aaggtctccgaccgttcgctggtgtggaactcggacctgatcgagacctacgagctgaac
aacctgctgctcaacgcggtggcgacgatcaactcggccgaacagcgcaaggaaagccgc
ggcgcgcatgcgcacgaggacttcccggaccgcgacgacgtcaactggcagaagcacacc
ctggtcagcgtcgacgagaagggcaagtgcagcttcgactaccgtccggtgcacatgtac
acgttgaccgacgacgtgtccgtggtgccgccgaagccgcgcgtgtactga
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