Stenotrophomonas geniculata: RKE57_08380
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Entry
RKE57_08380 CDS
T09411
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_08380
Enzymes [BR:
sgen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RKE57_08380
DNA repair and recombination proteins [BR:
sgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RKE57_08380
Prokaryotic type
RKE57_08380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WNF12134
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All DBs
Position
1793864..1795279
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALDAGHDVVPVYIHAPHEEGGWAPGAASDAWRHRSLAA
LDADLRTRGSSLVLRSGDSLPALQLLIEQTGAGAVYWNRKYEPATQPRDATIKRMLREQG
IDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWRLPSLQAAPKALAAHAVDSLA
LDDLQLAPTLDWDTGFWEHWQPGEAGALEALSVFEDGALRGYREQRDLPDRVGTSRLSPH
LHFGEIAPWRIAHALEGLRSAGTDADIDGYLRQLGWRDFAYHLLHHFPKTPTDNLNPRFD
RFPWATPSDAQLHDWQRGNTGVPIVDAGLRELWHTGYMHNRVRMIVASYLCKHLRAHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEQFDPQARYISRWVPE
LAALPVKARFAPWQHPLLLAAHAPGYPRTPLVDLAAGRDAALAAYRQSGAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtatggttccgccgtgatctgcggctgcaggacaatccggccctg
caggccgcgctggatgccggtcacgacgtggtgccggtctacatccatgcgccgcacgaa
gaaggcgggtgggcgccgggtgccgcctccgatgcgtggcgccaccgttcactggccgcg
ctggatgcggacctgcgcacgcggggttcctcgctggtgctgcgcagtggtgacagcctg
ccggccctgcagttgctgatcgagcagaccggcgccggggcggtctactggaaccgcaaa
tacgaaccggccacccagccacgcgacgccaccatcaagcgcatgctgcgcgagcagggc
atcgacgcgcagagctgcaatggcagcctgcttttcgagccctgggacatcgcgacccag
cagggccagccgtacaaggtgttcacgccgtactggcgcaacgtactcagtcattggcgc
ctgccttcgctgcaggccgcaccgaaggcactggcggcacacgcggtcgacagcctcgca
ctggatgatctccagctggcaccgacgctggactgggataccggcttctgggaacactgg
cagccgggtgaagccggtgcgctggaagcactgtccgtctttgaagatggtgccctgcgc
gggtatcgcgagcagcgggacctgccggaccgtgtcggtacctcgcggctgtcaccgcac
ctgcatttcggcgaaatcgccccctggcggattgcccatgcgctggaagggctgcgtagt
gccggcaccgacgccgacatcgacggctacctgcgccagctgggctggcgtgactttgcc
taccacctgctgcatcacttcccgaagacgcccaccgacaacctcaacccccgtttcgat
cgcttcccatgggcaacgcccagtgacgcgcagctgcacgactggcagcgcggcaacacc
ggcgtgccgatcgtcgacgcaggcctgcgcgagctgtggcacaccggctacatgcacaac
cgggtgcggatgatcgttgccagctacctgtgcaagcacctgcgtgcgcactggcttcac
ggcgcgcgctggttctgggacaccctggtcgatgccgacctggccaacaacacgatgggc
tggcaatgggtggccgggaccggcgccgatgccgcaccgtacttccgcgtgttcaacccg
gtcacccaggccgagcagttcgacccgcaggcccgctacatcagccgctgggtgcccgaa
ctggcggcgctgccggtgaaggcgcgcttcgcgccgtggcagcatccgctgctgctggcg
gcgcatgccccgggctatccgcgtacgccgctggtggatctggcggctggccgcgatgcc
gcgctggctgcctaccggcagtcaggagcggggtaa
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