Stenotrophomonas geniculata: RKE57_09080
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Entry
RKE57_09080 CDS
T09411
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgen03000
]
RKE57_09080
Transcription factors [BR:
sgen03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RKE57_09080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_41
HTH_11
HTH_22
HTH_36
TetR_C_3
LacI
HTH_32
TetR_C_24
DUF134
HTH_Tnp_1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
WNF12269
LinkDB
All DBs
Position
1953538..1954149
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AA seq
203 aa
AA seq
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MPRAPQRLTDRKRDAIVRAAVEEFRASGYEATSMDRIAEAAGVSKRTVYNHFPSKEALFS
MILEELWERSVASDALPYRADQPLQAQLLQLLGQKLELLSDANFIDLARVAMAEIIHSPE
RAQAIVCRMGEKESGESAWIRAAIADGRLREVDPEFAGHQLHGLVKSFAFWPQVTMGQAP
LNAQERARVAESAVAMFLGFYAV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccgcaacgcctgaccgaccgtaaacgcgacgccatcgtgcgcgcggcg
gtggaggagttccgtgcctcaggctacgaggccaccagcatggaccgcatcgccgaggcg
gccggggtctccaagcgcaccgtctacaaccactttcccagcaaggaagcgttgttctcg
atgatcctggaggagctctgggaacgcagcgtggccagcgacgcgttaccgtaccgcgcc
gaccagccgctgcaggcgcagctgctgcagttgctcggccagaagctggaactgctcagc
gatgccaacttcattgacctggcgcgggtggcgatggccgagatcatccactcaccggag
cgcgcgcaggccatcgtctgccgcatgggcgaaaaggaaagcggcgagagtgcctggatc
cgcgcggccatcgccgatggccggctgcgcgaggtcgatccggagttcgccggccaccag
ctgcatgggttggtgaagagcttcgcgttctggccacaggtgacgatggggcaggcaccg
ttgaatgcacaggagcgtgcacgcgtggcggaatcggcggtagcgatgttcctgggtttc
tacgcggtctag
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integrated database retrieval system
