Stenotrophomonas geniculata: RKE57_09230
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Entry
RKE57_09230 CDS
T09411
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgen03000
]
RKE57_09230
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sgen01504
]
RKE57_09230
Transcription factors [BR:
sgen03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RKE57_09230
Antimicrobial resistance genes [BR:
sgen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
RKE57_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_IclR
HTH_20
DUF6262
HTH_24
HTH_7
HTH_26
HTH_6
Mga
Motif
Other DBs
NCBI-ProteinID:
WNF12296
LinkDB
All DBs
Position
1981325..1981891
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AA seq
188 aa
AA seq
DB search
MRPAAARTRRDLHHALAATLVSHPRCTLSELAQGAGISRATLYRFAPTREAIDEALFAAG
FERLEAAAVWFDEGGDARHVLEQVTATLLADWELVTLLFARMMEEQQRQGDLHLLPERWA
PIGERFEAFFLRGQAAGEFNVGFTAVWLADFYWTCFYGITWSLARGRLAPAAAASTLLAS
FQRGAMKG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgccgcagcacgcacccgccgcgacctgcaccacgccctggcagccaccctg
gtcagccatccgcgttgcacgctcagcgaactggcgcagggggcaggcatcagccgggcc
acgctgtatcggtttgcaccgacacgtgaagcgatagacgaagcactgttcgccgcaggc
ttcgagcgtctggaagcggcggcggtctggttcgacgagggcggtgatgcacgccacgtg
ctggagcaggtcaccgccacgctgctggcggactgggaactggtgacgctgctgttcgcg
cggatgatggaagagcagcagcgccaaggcgacctgcatctgctgccggagcgctgggcg
ccgatcggcgagcgcttcgaggcctttttcctgcgtggtcaggcggccggagagttcaac
gtcggtttcaccgcagtgtggctcgcggacttctactggacgtgtttctacggcatcacc
tggtcactcgcacgtggtcggctggcgccggccgcggcggcctccacgctgctggcgtcg
ttccagcggggggcgatgaagggatga
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