Stenotrophomonas geniculata: RKE57_09330
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Entry
RKE57_09330 CDS
T09411
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgen03000
]
RKE57_09330
Transcription factors [BR:
sgen03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RKE57_09330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_20
MarR_2
HTH_5
MarR
CHASE5
CggR_N
Motif
Other DBs
NCBI-ProteinID:
WNF12316
LinkDB
All DBs
Position
complement(2001199..2001951)
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AA seq
250 aa
AA seq
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MSRPSGAPPATNDPASPSCATLDCLHCSVRHLAVCSALSPDEVQALEQVTVSQQVSMGST
LARTGEERDHVYTLTGGALRLVRTLADGRRQINGFVLPGDYLGLSGSDHHRYDIEAIADS
RVCRVALPQMKALRGRFPHLERKLLQRACQELDAAQDAALALARLQPAEKLADFLLRLAA
REAKLGGDGLRVSLPMGRGDIADHLGLTMETVSRTFTKLRQQGLIALPHLNVVEILDEDG
LRTLAGEGLI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggccttccggcgctccgcccgccaccaacgatcccgcctcgccgtcctgcgcc
acgctggactgcctgcactgctcggttcgccaccttgcggtgtgctcggcgctgtcgccc
gatgaagtgcaggcgctggaacaggtcaccgtatcgcagcaggtcagcatgggcagcacg
ctggcccgcaccggtgaagagcgcgaccatgtctatacattgaccggcggcgcactgcgc
ctggtgcgcaccctggccgacggccgccgccagatcaacggcttcgtgctgcccggcgac
tacctgggcctgagcggcagcgaccaccaccgctacgacatcgaggccatcgccgacagc
cgggtatgccgcgttgcgctgccacagatgaaggcgttgcgcggccgcttcccgcacctg
gagcgcaagctgctgcagcgcgcctgccaggaactggatgccgcacaggatgctgcgctg
gcactcgcacgcctgcagcctgccgaaaaactggccgatttcctgctgcgcctggctgca
cgcgaggccaagctgggtggcgacggcctgcgtgtgtcgctgccaatgggccgcggcgac
atcgccgaccacctgggcctgaccatggaaacggtcagccgcaccttcaccaagctgcgc
cagcaggggctgatcgccctgccccacctgaacgtggtggagatcctcgacgaggacggg
ctgcgcacgctggcgggtgaagggttgatctga
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