Stenotrophomonas geniculata: RKE57_09560
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Entry
RKE57_09560 CDS
T09411
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00280
Valine, leucine and isoleucine degradation
sgen00650
Butanoate metabolism
sgen00907
Pinene, camphor and geraniol degradation
sgen01100
Metabolic pathways
sgen01120
Microbial metabolism in diverse environments
sgen04146
Peroxisome
Module
sgen_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RKE57_09560
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RKE57_09560
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RKE57_09560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RKE57_09560
Enzymes [BR:
sgen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RKE57_09560
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
WNF12362
LinkDB
All DBs
Position
complement(2058625..2059521)
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AA seq
298 aa
AA seq
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MSDYVRIVEVGPRDGLQNEKQSVSTADKIELINRLSATGLRSIEATSFVSPKWIPQLADA
AEVYAGIQRRPGIHYPVLVPNEQGYDRARAVGVEEVAVFTAASEAFNRTNTNAGIDESLA
RFEPILRRAAADGVRVRGYVSTVLGCPYQGEVPLADVVRVARALHQMGCYEISLGDTIGV
GTPRKARAMLQAVAAEIPMAALAVHFHDTYGQAIANIATCLEEGVRVIDSAVSGAGGCPY
AKGASGNVASEDVVYLLQGLGLDSGVDLPALAETGRWLAGLLGRATASRTGQALAAAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactacgtccgcatcgtcgaggtcggcccgcgtgacggcctgcagaacgaaaag
cagtcggtgtccaccgccgacaagatcgaactgatcaaccgcctgtcggccaccggcctg
cgcagcatcgaggcaaccagcttcgtcagcccgaagtggatcccacagctggccgacgcc
gccgaggtctatgccggcatccagcgccggccgggcatccactacccggtactggtgccg
aacgaacagggctacgaccgcgcccgtgcggtgggcgtggaggaagtagcggtgtttacc
gctgcctccgaagcgttcaaccgcaccaacaccaatgccggcatcgacgaatcgctcgcc
cggttcgagccgatcctgcgccgcgccgccgccgatggcgtgcgcgtgcgcggctacgtc
tccaccgtgctcggctgcccctaccagggcgaggtgccgctggccgacgtggtgcgggtg
gcgcgcgccctgcaccagatgggctgttacgaaatctcactgggcgacaccatcggcgtc
ggcaccccgcgcaaggcacgggcgatgctgcaggcggtcgccgccgagatcccgatggcg
gcgctggccgtgcatttccacgacacctacggccaggccatcgccaacatcgccacctgc
ctggaagaaggcgtgcgcgtgatcgacagcgcggtatcgggggccggtggctgcccgtat
gcgaagggcgccagcggcaacgtcgccagcgaggacgtggtctatctgctgcaggggctc
ggcctggacagcggcgtggacctgccggccctggccgagaccggccgctggctggccggc
ctgctcggccgcgccaccgccagccgcaccggccaggcgctggccgccgccggttga
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