Stenotrophomonas geniculata: RKE57_09620
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Entry
RKE57_09620 CDS
T09411
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00220
Arginine biosynthesis
sgen00240
Pyrimidine metabolism
sgen00250
Alanine, aspartate and glutamate metabolism
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RKE57_09620 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RKE57_09620 (carB)
00220 Arginine biosynthesis
RKE57_09620 (carB)
Enzymes [BR:
sgen01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RKE57_09620 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WNF12372
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Position
2068043..2071285
Genome browser
AA seq
1080 aa
AA seq
DB search
MPKRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEM
ADAVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKR
EAIRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVGYPTIIRPSFTLGGSGGG
IAYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPM
GVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPKTGRVVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIP
RFAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTGLDLANEE
DLQTLRRELKAPGPERLFFVADAFRAGMSVEEIYALSFIDHWFLDQIEEIIAAEAEVTAG
GIDALDAARLRKLKRAGFSDARLAQLTGTNEAAIRALRRAHKVRPVYKRVDSCAGEFSTG
TAYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLARALEANGVP
VIGTSPDSIDLAEDRERFQQLVDKLGLKQPPNRIARNDQEALLLAREIGYPLVVRPSYVL
GGRAMEIVYGEADLARYVRDAVKVSNDSPVLLDRFLDNAVECDVDIIADKDGNVLIGGVM
EHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVGLMNTQFAIQTSDEGA
DTIYLLEVNPRASRTVPFVSKATGMPLAKIAARCMAGKSLAEQGATKEIVPDYYSVKEAI
FPFAKFQGVDPILGPEMRSTGEVMGVGRTFNAAFARAQEAGGIKAPPVGKAFVSVRDPDK
KRVLPVAKALLARGYSLVATRGTAAWLQQHGMDCEIINKVVEGRPHIVDSIKNGEIVYIV
NTTEGRSAINDSFSIRREALQHRVTYSTTIAGAKALVDSLEFRGTGPVWSLQELHKELNA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcactgacctcaagaccatcctcatcatcggtgctggcccgatcgtcatc
ggccaggcctgcgagttcgactactccggcgcccaggcctgcaaggccctgcgtgacgag
ggttaccgcgtggtgctggtcaacagcaacccggccacgatcatgaccgatccggagatg
gccgacgccgtctacatcgagccgatcaactggcagacggtcgagaagatcatcgccaag
gaaaagcccgacgcgctgctgccgaccatgggtggccagaccgcgctgaactgcgcgctg
gacctggccgacaacggcgtgctggagaagtacaacgtcgaactgatcggcgccaagcgc
gaagcgatccgcatggccgaagaccgcgagctgttccgcgtggccatgggtgagatcggc
ctggaatgcccgaccgccgccgtcgcccacaccctggacgaagcgctggagatccagacc
cgcgtcggctacccgaccatcatccgccccagcttcaccctgggcggcagcggtggcggc
attgcctacaaccgcgaagagctggtcgagatcgtcagccgcggcctggaactgtcgccg
accaccgaagtgctggtggaagagtcggtgctgggctggaaggaattcgagatggaagtg
gtccgcgatactgcggacaactgcatcatcgtctgctcgatcgaaaacctggacccgatg
ggcgtgcacaccggtgactcgatcactgtggcgccggcgcagaccctgaccgacaaggaa
taccagcgcctgcgcgatgcctccatcgccgtgctgcgcaagatcggtgtcgataccggt
ggctcgaacgtgcagttcggtatcaacccgaagaccggccgtgtggtcgtcatcgagatg
aatccgcgtgtgtcgcgttcctcggcgctggcttccaaggccaccggcttcccgatcgcc
aaggtcgccgcgaagctggccgtgggctacaccctggacgaactgaagaacgagatcacc
ggcggcctgaccccggcctcgttcgagccgtccatcgactacgtcgtcaccaagatcccg
cgtttcgccttcgagaagttcccggccgccgacgcccgcctgaccacccagatgaagtcg
gtgggcgaggtgatggcgatgggccgcactttccaggagtcggtgcagaaggccctgcgt
ggcctggaaaccggcaaggtcggcttcgacccgaccggcctggacctggccaacgaagaa
gacctgcagaccctgcgccgcgagctgaaggcgccgggcccggagcgcctgttcttcgtc
gccgatgcgttccgcgccggcatgagcgtggaagagatctacgcactgtcgttcatcgat
cactggttcctggaccagatcgaggaaatcatcgcagcggaagctgaagtcactgccggt
ggcatcgacgcgctggacgctgcgcgcctgcgcaagctgaagcgtgccggtttctccgac
gcccgcctggcgcagctgaccggcaccaacgaagcggccatccgcgcgctgcgccgtgcg
cacaaggtacgtccggtctacaagcgcgttgactcctgtgccggtgagttctccaccggt
accgcctacctgtactcgacctacgaggacgagtgcgaggccgcgccgagcaaccgcgac
aagatcatgatcctgggcggtggcccgaaccgcatcggccagggcatcgagttcgactac
tgctgcgtgcacgcggcactggcgctgcgcgaggatggttatgaaaccatcatggtcaac
tgcaacccggaaaccgtgtcgaccgactacgacacctccgaccgcctgtacttcgaaccg
ctgaccctggaagacgtgctggaaatcgtcgagctggaacagccgaagggcgtgatcgtg
cagtacggcggccagaccccgctgaagctggcgcgcgcgctggaagccaacggcgtgccg
gtgatcggcaccagcccggactcgatcgacctggccgaagaccgtgagcgcttccagcag
ctggtcgacaagctgggcctgaagcagccgccgaaccgcatcgcccgcaacgaccaggaa
gccctgctgctggcccgcgagatcggctacccgctggtggtgcgcccgagctacgtgctg
ggcggccgtgcgatggagatcgtctacggcgaagccgaccttgcccgctacgtgcgcgac
gcggtgaaggtgtccaacgattcgccggtgctgctggaccgcttcctcgacaacgccgtc
gagtgcgacgtcgacatcatcgccgacaaggatggcaacgtcctgatcggtggcgtgatg
gagcacatcgaagaagccggtgttcactcgggcgattcctcctgctcgctgccgccgtac
tcgctgtcggctgaaacccaggccgaactgcgccgccaggtggtggagctggccaaggcc
ctgaacgtggtcggcctgatgaacacccagttcgcgatccagaccagcgacgaaggtgcc
gacaccatctacctgctggaagtgaacccgcgtgcctcgcgcaccgtgccgttcgtgtcc
aaggccaccggcatgccgctggccaagatcgccgcccgttgcatggctggcaagagcctg
gccgagcagggtgcaaccaaggaaatcgtgccggactattactcggtgaaggaagcgatc
ttcccgttcgccaagttccagggcgtcgatccgatcctcgggccggagatgcgctccacc
ggtgaagtgatgggcgtaggccgcaccttcaacgccgccttcgcgcgtgcgcaggaagcc
ggtggcatcaaggcgccgccggtcggcaaggccttcgtttcggtgcgtgatccggacaag
aagcgcgtgctgccggtggccaaggcgctgctggcgcgtggctacagcctggtcgccacc
cgtggcaccgccgcgtggctgcagcagcatggcatggactgcgagatcatcaacaaggtg
gtcgaaggccgtccgcacatcgtcgactcgatcaagaacggcgagatcgtctacatcgtc
aacacgaccgaaggtcgttcggcgatcaacgactcgttctcgatccgtcgcgaggcactg
cagcatcgcgtcacctactcgaccaccattgccggcgccaaggcgctggtggattcactg
gaattccgcggcaccggccccgtctggtcgctgcaggagctgcacaaggagttgaatgca
tga
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