Stenotrophomonas geniculata: RKE57_09870
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Entry
RKE57_09870 CDS
T09411
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen02020
Two-component system
sgen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RKE57_09870
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RKE57_09870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgen03021
]
RKE57_09870
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sgen02035
]
RKE57_09870
Transcription machinery [BR:
sgen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RKE57_09870
Bacterial motility proteins [BR:
sgen02035
]
Flagellar system
Flagellar assembly proteins
Stator
RKE57_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
WNF12420
LinkDB
All DBs
Position
complement(2136510..2137253)
Genome browser
AA seq
247 aa
AA seq
DB search
MKGAAQYREVQRTAANEVIAQHSDLVRRIAHHLAARLPASVEVDDLIQAGMMGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAATIRRLEQSSGRAASAT
EVAAAMEMPLPEYLRLMEDAARGQVLSLESRIEDQGELDTVAQGGPTPQQVLERGEFGRE
LGKAIGHLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVLRLRGRLKLFEA
ADAGLEE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgcagcccagtaccgggaagtccagcgcacggcggccaacgaggtcatcgcc
cagcattcggacctggtgcggcgcatcgcccaccacctggccgcacgcctgccggcgagc
gtcgaggtcgacgacctgatccaggccggcatgatgggactgatcgaagcctcgcgcagc
tatgacgccgaccagggggcttcgttcgagacctatgcctcgatccgcatccgcggttcg
atgatcgatgagatccgccgtggcgactgggtgccgcgctcggtgcaccgccgtgcacgt
gatgccgccgccaccatccgccgcctggaacagagcagtggccgtgccgccagcgccacc
gaagtggccgccgcgatggagatgccattgcccgagtacctgcggctgatggaagacgct
gcccgtggccaggtgctgagtcttgaatcgcgcatcgaggaccagggcgagctggacacc
gtggcccagggcggcccgaccccgcagcaggtgctggagcgcggcgagttcggccgcgag
ctgggcaaggccatcggccacctgcccgagcgcgaacagctggtgctctcgctgtactac
gagcaggaactgaacctgaaggagatcggcgcggtgctcggcgtgagcgagtcgcgggtc
tgccagatccacggccaggcggtactgcgcctgcgtggccggctgaagctgttcgaggcc
gccgacgccggcctcgaagaatga
DBGET
integrated database retrieval system
