Stenotrophomonas geniculata: RKE57_10415
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Entry
RKE57_10415 CDS
T09411
Name
(GenBank) tape measure protein
Organism
sgen
Stenotrophomonas geniculata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_3
Motif
Other DBs
NCBI-ProteinID:
WNF12525
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All DBs
Position
2237378..2242351
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AA seq
1657 aa
AA seq
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MNPTVTLRLDADNSRLVPAVRASDAELKRLGATAGTTGDQARRGAAGISSIGTAADSTAR
RVSAVSSALASARATVATYIGAQTAGALISVADNYANISARLKLATEGHKAYATASAQVF
NISQRTATALDSTATLYARLSQSTAEYGITQQRQLALTESINKTFAISGASNVATANTIV
QLSQALAGGVLRAEEFNSVVENSPRLAKALADGMGLSMGELRKHVNDGKVTVDQMVAALE
NQSSVIAAEFEQIPLTVGRAMELLRNSVTKFVGESSQELGASGGIAQGIAFLANNMQRLD
QIAGILAVALGSRLVVSLARATAEKITAAAASRALAREELAEARIAEQQAAGRLSAARAG
MSVAGGVAAAEQALAAAQLRTAAAAQAASVALTAKAAAMRGLNVAMGAFGGPAGLAITAL
SLFVAWAMNSNQKAQELSKTVTAGFQPAMRVLQEFNQQTANTSFAELSNTVETIEAARQE
IKNLGDEYERLAATRRSFQARDRALPFGFDKELEGASAAIESARLRLDNLSKGYDRAISV
SASLVLRAANVTDATDAQRRSLEELLKRQANQGQTLEQTRPLLEQWAKDQLGVDNANRIA
AASFDTVATAARNSGAAIKAALQSVNEGLDKQIQSVQLDLIEKTQGKAARMRAQFITESA
QKGLDPTSSDYQLARAKNEQLIQLTLTLDKQNAATRDLTRTQTEAKRSGEHAARLAEQQA
DSQAKYTRQAALAAAELSGPMAAAQEQHKQRIAELDRELAKHLITQEAYASLVKSSAAEL
AKNAAEVTKQQQAPKALLDTLSGEVQLLGVVGIERERRARQLRNEQDMLQAINEANKAGA
GINAEATAGLMAQARAWANASIRIEQQTADLEEWANVGTRGVADVADMLADMFSGGLDKS
ESFFSRLKDIFKRGWRDIVRTMLEQNLVRPFQDALTNAMNGALAGVSRGQADGNWLSKIA
GMFGGGNQGGAGSGWMSSLANMIGGGRNLTGTNAMLAGGGWRAGVAAPGKIMGFGNNVGG
FIGTGAAGGGAASASMAVPIIGWVVAAMMKNAELFDQGWDIANGESWAGKIATLGAVGHV
DKMARKLGLNAKAASILSGSSIHAALFGRKKPQIQAQGLTGSYGFDGFAGQSYADIKAKG
GLFRSDKKWTEYGQVDTTITDAFSQATGRARAGVISLAEQLGVDINSQLSSVRVDLGKVQ
LDADPDKAQAQLEQLIAGAAKNLTGRGVSILGFGDFLNKGFEAGDVMNSLAASIELMTGN
AQELGRALNAQEIDLVKRTTTMFQQMAKAAGTTMEEQVKAITTAASSYGSVVGNAQQEIA
TDGFSGFAKSLLAVRQEEQERIRTLQQQAKALGGLAAREQDLATVRQAAQLKADALARSL
ESELVGLALNRVNDEIERLGGSIDGTSSKLQDFINSLKLSSTLSPDTDTQKRSTASDLMQ
SAANAGNLESFTQYAQQFLEVSRKLNASGQGYQVDYAQVLELAKRFGGDGTAASLQQLYA
QKAALEQQQEAAARLERAQRIAQGVADLAGARGGDPLEILRNVTGISAEALAKDLGLTTD
ELAKYLQNQQTDITDLAEILFDLPKRIAQEMVTVLTDSRVPVPASAAPGGGTTPAAPAAP
AAPGRGYADPSYEVLLQVRDGIQSLARQGEHNALMAL
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccaacagtcaccctccgcctcgatgccgacaacagccgcctggtgccagccgtt
cgggcatcagatgcggagctcaagcgactgggcgcgacggcagggacaaccggcgaccag
gcacggcgtggtgctgccggcatttccagcatcggcacggcggcggattccaccgctcgc
cgtgtctctgctgtgtccagcgcactggcatcggcgcgggcgacggtggccacctacatt
ggcgcgcagacggccggtgccctcatttccgttgcggacaactacgccaacatatcagcg
cggctcaagctggcaacggagggacacaaggcctatgccaccgcatcggctcaggtgttc
aacatctcccagcgcaccgccaccgcgctcgacagtaccgccaccctctacgcgcgcctg
tcccagtccactgccgagtatggaatcacccagcaacggcagctggcgctcaccgagtcc
atcaacaagacgttcgccatctccggcgccagcaacgtcgccaccgccaacaccatcgtc
cagctcagtcaggcgctggctgggggcgtgctacgcgcggaggaattcaactctgtcgtg
gaaaactcgccgcgtctggccaaggcgctggccgatggtatgggcctgtcgatgggcgag
ctgcgcaagcacgtgaacgacggcaaggtgaccgtcgatcagatggtggccgcgcttgag
aaccagtcctccgtcatcgccgccgagtttgagcagatcccgctcacggtcgggcgcgcc
atggagctgctgcgcaacagcgtcacgaagtttgtcggcgagtcctcccaggagctgggc
gccagcggcggtatcgctcagggcatcgcgttccttgccaacaacatgcagcgcctggac
cagatcgcgggcatcttggctgtcgccttgggaagccgcctggtcgtcagcttggccagg
gctacggccgagaagatcacggccgccgccgcctcgcgagcgctcgcccgcgaggagctg
gctgaagcccgaatcgccgagcagcaggcggcaggccgcctgtcggccgcgcgcgccggc
atgagcgtggcaggtggcgtagccgcggctgagcaggccctggccgctgcccagcttcgc
accgccgccgcagcccaggccgcgtccgtggcgctcaccgcaaaagctgccgccatgcga
ggcctcaacgtggcgatgggcgcgtttggtggacctgcggggcttgctatcaccgcactg
tcgctgttcgtcgcctgggcgatgaacagcaaccagaaggcacaggagctgtccaagacc
gttacggccggtttccagcccgccatgcgggtgctgcaggagttcaatcagcagactgcg
aacacgtcattcgcagagctttcaaacaccgttgaaaccattgaagccgcgcgccaagag
atcaagaacctgggcgatgagtacgagcgccttgcggcaacccgccgttcgttccaggcc
cgtgaccgtgctctgccgttcgggttcgacaaggaactggagggtgcatcggcggccatc
gagtctgcgcgccttcgcctggacaacctgtccaagggctatgacagggcaatctctgta
tcggccagcctggtgctgcgcgccgccaacgtaaccgacgccacggacgcccagcgccgc
tctctggaggagttgctcaagcgccaggccaaccagggccagacgctggagcaaacccgg
ccgctgctggagcagtgggcgaaagatcagctcggcgtggacaacgccaaccgtatcgcg
gcggcgagcttcgataccgtggcgaccgcagcgcgcaactctggcgccgcgatcaaggct
gccctccagtcggtcaacgaaggcctggacaagcagattcagagtgtccagctggacctg
atcgagaagacgcagggcaaggcagcccgcatgcgtgcgcagttcatcacggaaagcgct
cagaaggggctggacccgaccagctccgactatcagctggcgcgggccaagaacgaacag
ctcatccagctcaccctgacgctggacaagcagaatgcggccacccgtgatctgacgcgc
acccagaccgaggccaagcgctccggcgagcatgccgcgcgcctggcagagcagcaggcc
gattcccaggccaagtacacccgccaggcggcgttggctgctgccgagctctccgggccg
atggcggctgcccaggagcagcacaagcagcgtattgccgagctcgaccgcgaactggcc
aagcacctcatcacccaggaggcctacgccagcctggtgaagtcgtcagcggccgagttg
gccaagaatgccgccgaggtcaccaagcagcagcaggcgcccaaggcattgctcgatacg
ctgagcggcgaggtgcagctgctgggcgtggtcgggatcgagcgcgagcgccgcgcccgc
cagctgcgcaatgagcaggacatgctccaggcgatcaacgaggccaacaaggccggtgcc
ggcatcaacgcagaggcaaccgcaggcctgatggcccaggcacgggcgtgggccaatgcc
tccattcgcatcgagcagcagaccgccgacctggaggaatgggccaacgtcggaacgcgc
ggtgtcgcggatgtggccgatatgctggccgatatgttcagcggcgggctggacaagtct
gagagcttcttcagccgcctcaaggacattttcaagcgtggttggcgggacatcgtgcgc
accatgcttgagcagaacctggtgcgcccgttccaggatgcgctcactaacgccatgaat
ggcgcgctggctggtgtgtcgcgtggccaagctgatggcaactggttgtcgaagatcgcc
ggcatgttcggtggcggcaaccagggcggcgcgggctcgggctggatgagcagcctggcc
aacatgatcggtggcggccgcaacctcactggcaccaacgccatgctggccggtggcggc
tggcgtgccggggtggctgcgccaggcaagatcatgggctttggcaacaacgtcggcggt
ttcattggcaccggggctgctggtggcggcgcggcgtccgcatcgatggccgtgccgatc
atcggctgggtggtcgcggccatgatgaagaatgccgagctgttcgatcagggctgggac
atcgccaatggcgaaagctgggcgggcaagatcgccaccctgggcgccgtgggtcacgtc
gataagatggcgcgcaagctcggcctcaacgccaaagccgcctccattctgtctggctcc
tcgatccatgctgccctgttcggccgcaagaagccgcagatccaggcgcagggcctgacc
ggctcatatggcttcgacggattcgctggtcagtcctacgccgacatcaaggccaagggc
ggcttgttccgcagcgacaagaagtggaccgagtatggccaggtcgatactacgatcacc
gacgctttcagccaggccactgggcgcgcgcgtgcaggcgtcatcagcctggccgagcag
ctgggcgtggacatcaacagccagctgtcctccgtccgcgtagacctcggcaaggttcag
ctcgatgcggacccggacaaggcccaggcgcagctggagcaactgattgccggcgccgcc
aagaacctgaccgggcgcggcgtgtcgatcctcggtttcggcgacttcctcaacaagggg
tttgaagccggcgacgtgatgaacagcctggcggcgtccatcgagctgatgaccggcaac
gcccaagagctgggccgtgcgctcaatgcccaggaaatcgacctggtcaagcgcacgaca
acaatgttccagcagatggccaaggctgccggcaccaccatggaggaacaggtcaaggcg
atcactaccgccgcctcctcctacggcagcgtagtgggcaacgcgcagcaggagatcgca
acggatggattcagtggcttcgccaagtcgctcctggctgtgcgccaggaggagcaggag
cgcatccgcacgctgcagcagcaggccaaggctctgggcggcctagcagcccgcgagcag
gatctggccaccgtccgccaggccgcccagctcaaggccgacgcactggctaggtcgctg
gagtcggagctggtaggcctggcgctcaatcgcgtcaacgatgaaatcgaacgcctgggc
ggttccatcgacggaaccagcagcaagctgcaggacttcatcaactcgctcaagctgagc
agcacgctgtcaccggacaccgacacgcagaagcgttccacggcatcggatctgatgcag
agcgccgccaacgccggcaacctggagagcttcacccaatacgcccagcagttcctggaa
gtcagccgcaaactcaatgccagcggccagggctatcaggtggactatgcccaggtgctg
gagctcgccaagcgctttggcggtgatggcacggccgcgtcgctgcagcagctgtacgcg
caaaaggctgccttggaacagcagcaggaagctgccgcccgcctggagcgcgctcagcgc
atcgcccagggcgtggccgatctagctggcgcccgtggcggcgatccgctggagatcctg
cgcaacgtcactggcatcagcgctgaggcgctggccaaggatctgggcctgaccacggac
gaactggccaagtacctgcagaaccagcagaccgacatcaccgacctggcagaaatcctg
ttcgatctgcccaagcgcatcgcccaggagatggtcacggtgctgaccgacagccgcgtt
ccagtcccggcgtcggccgcgcctggcggtggcaccacgcctgcagcaccagctgcgcca
gcggcgccagggcgtggctacgccgatccttcctatgaggtgctgctgcaggtccgcgac
ggcatccagtccctggcacgccagggtgaacacaacgctttgatggcgctatga
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