Stenotrophomonas geniculata: RKE57_10950
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Entry
RKE57_10950 CDS
T09411
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00520
Amino sugar and nucleotide sugar metabolism
sgen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RKE57_10950
Enzymes [BR:
sgen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
RKE57_10950
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
WNF12661
LinkDB
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Position
complement(2356653..2358347)
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AA seq
564 aa
AA seq
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MARHLLGALFLLSAATTRASAPPDAPPVYFDWFEYRGNDQAFEVPLPAGHYRNPVLAGFH
ADPSIVRANGRFYLVNSSFTYFPGIPVFESADLVHWKQIGNVIDRPTQLDFDGLSVSRGI
FAPTIEYHDGTFYVTTTATDSGGNFIATARDPAGPWSDPHWLPGIDGIDPSLFFDDDGKV
YLVNNDAPPGPPRYDGHRAIWMQQIDLAAFRPVGPRRVLVDGGVEPAKNPIWIEGPHIYK
REGWYYLSDAEGGTGPQHSQVVLRSRTVWGPYVPYTGNPILTQRELPDDRPLPITNAGHA
DLVEGPDGSWWAVFLASRNYQKRHYNTGRETYLLPVRWQDGWPQILPVDQAIPYVAKAPA
WMQGEASQAPSTGNFVARDNFDGPTLDPQWLRVRVPRHAWADLATRPGMLAVHPLAEDLD
TLRNPTFLGRRQQHLRFEASTAMTPPASGVAAGLAAFQSEAYWYFLGVRDLGGGRLSLFL
EARDGGRSTRTLASREVPVPAALRLKIAGNEGDYAFSFDTGDGQGWQLLAGGVDGTVLST
DRAGGFVGALLGPFARDERTGRSK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccacctgctgggggcgttgttcctgctgtcggccgcaaccacccgggccagc
gcgccgccggatgctcccccggtgtacttcgactggttcgagtaccgcggcaatgaccag
gcgtttgaagtgcccctaccggccggccactaccgcaatcctgtcctggccggcttccat
gccgatcccagcatcgtgcgcgcgaacggccggttctacctggtcaattccagcttcacc
tacttcccgggcattccggtgttcgaaagtgccgacctggtgcactggaagcagatcggc
aatgtgattgaccgccccacgcaactggatttcgacggcctgagcgtctcgcgcggcatc
ttcgcgccgaccatcgagtaccacgacggcaccttctacgtaaccaccaccgccaccgac
agtggtggcaacttcatcgccaccgcgcgtgatccggccggtccgtggtccgatccgcac
tggctgcccggcatcgatggcatcgacccgtcactgttcttcgacgatgacggcaaggta
tacctggtcaacaacgatgcaccgcccggcccgccgcgctacgacgggcaccgcgccatc
tggatgcagcagatcgatctggcggcattcaggccggtcgggccgcgccgggtgctggtt
gatggaggcgtggagccggcgaagaatcccatctggatcgagggaccgcatatctacaag
cgggagggctggtattacctgtccgacgctgaaggaggtaccgggccgcagcattcgcag
gtggtgctgcgcagccgcacggtgtggggcccctacgttccctatacgggcaatccgatc
ctgacccagcgagaactgccggatgaccgtccgcttccgatcaccaatgccggccatgcc
gacctggtcgaaggcccggatggctcgtggtgggcggtgttcctggccagccgcaactac
cagaagcggcactacaacaccgggcgcgagacctacctgttgccggtgcgctggcaggat
ggctggccgcagatcctgccggttgaccaggccattccctatgtggccaaggcccccgcg
tggatgcagggcgaggcatcccaggccccttcgaccggcaatttcgtagcgcgcgacaat
ttcgatggcccgacgcttgatccacagtggctgcgcgtgcgggtgccccggcatgcctgg
gccgacctggccacgcgccccggcatgctggccgtgcatccgcttgccgaggatctggac
acgctgcgcaatccgacgtttctcggccggcgccagcagcatctgcgcttcgaggcgagc
accgcgatgaccccgccagcttccggagtcgccgccggcctggcggcgttccagagcgag
gcgtactggtacttccttggcgttcgtgaccttggcggggggcgcctctcgctcttcctc
gaagcgcgcgacggtggccgcagcacgcggacgctggccagccgtgaagtaccggtgcct
gcagcactgcgcctgaagattgccggcaacgagggcgactatgcgttctcgttcgacacc
ggcgatgggcagggctggcaactgctcgcaggcggggtggacggcaccgttctgagtacg
gaccgggcaggcggcttcgtgggcgcactgctgggtcctttcgcgcgcgacgagcgcacc
gggagaagcaaatga
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