Stenotrophomonas geniculata: RKE57_11370
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Entry
RKE57_11370 CDS
T09411
Name
(GenBank) MacB family efflux pump subunit
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RKE57_11370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_11370
Transporters [BR:
sgen02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
RKE57_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
AAA_21
SMC_N
AAA_22
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_30
DUF6158
AAA_28
AAA_25
AAA_18
MMR_HSR1
AAA_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WNF08687
LinkDB
All DBs
Position
complement(2457476..2459419)
Genome browser
AA seq
647 aa
AA seq
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MVDALLELHGVSRAYRSAAGEVVVLKDVSLRIEAGQFIAIIGPSGSGKSTLMNILGCLDR
PSEGSYRVQGAATEQMSQDELAHLRREHFGFIFQRYNLMENLSATENVALPAVYAGVDAD
ARTARARMLLETLGLGERTTNRPSQLSGGQQQRVSIARSLMNGGAIVLADEPTGALDHAS
GRQVMAELKRLHAQGHTVILVTHDAAIAAHASRVIEIADGRVVSDRGMGDPPAARNAAAH
ERSPEPGAERRARLDAIREAARMAVRSMLAHRLRTLLTMLGIIIGVAAVVTVVALGKGAQ
AQVESQINELGASTLDIFPGADFGDPRSGEIETLVVDDADHLAALSYVDSVSPNLSGSVA
ALQGNRRANTQVLGVGADLPRVRGLRLKAGRFFTDAEVEAHRAVGVVDQKAAKALFNGNP
IGGTVLLGGMPVEVIGVVGPNAFAGGATPTVYVPYTSASSRLLGSQRLESITVRVRDDVP
TTAAEASLGAELQRLHGRRDFFIYNADQIRKAVMKSSQTMAALVSAIAAVALVVGGVGVM
NIMLVSVKERVREIGVRLAVGARQGDILRQFLIEAVLICLFGGVLGVLFALAVGALSSLL
SLGVPFLFTPGPVLAALACSSAIGLGFGYFPARSAAQLDPIQALAAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgcgctgctggaactgcatggcgtatcgcgcgcctatcgctcggccgccggc
gaggtggtggtgttgaaggacgtgtcgctgcgcatcgaggcgggccagttcatcgcgatc
atcggcccgtccggttcgggcaaatccacgctgatgaacattctgggctgcctggaccgg
ccaagcgaaggcagctaccgggtgcagggcgcagcaaccgagcagatgtcacaggatgaa
ctggcgcacctgcgccgcgagcatttcggcttcatcttccagcgctacaacctgatggag
aacctgagcgccacggaaaatgtggcattgccggcggtctatgccggcgtggatgccgat
gcgcgcaccgcccgtgcgcgcatgctgctggaaacgctgggattgggggagcgcactacg
aaccggcccagccagctgtccggcggccagcagcagcgcgtttccattgcgcgttcgctg
atgaacggcggcgccatcgtgctggccgacgagccgaccggcgcgctggatcatgccagc
ggccggcaggtgatggcggaactcaagcgcctgcatgcgcagggccataccgtgatcctg
gtgacccatgatgcggcgatcgccgcgcacgcttcacgcgtgatcgagatcgcagacggt
cgggtcgtttccgaccgtggtatgggtgatcctccggcagcacgcaatgctgctgcccac
gagcgcagtccagaaccgggcgccgagcgccgcgcgcgcctggatgcaatcagggaagct
gcacggatggcggtacgttcgatgctggcccatcgcctgcgcaccctgctgaccatgctg
ggcatcatcatcggcgtggctgcggtggtgaccgtggttgcgttgggcaagggcgcacag
gcacaggtcgagtcacagatcaacgaactgggtgccagtacgctggacatcttcccgggc
gcggactttggtgacccgcgctcgggcgagattgaaacgctggtggtggacgatgccgat
cacctggccgcattgagttacgtagacagcgtaagccccaacctgagcggttcggtggcg
gcactgcagggcaaccggcgcgccaacacgcaggtgcttggcgtgggcgctgatctaccg
cgtgtgcgcgggctgcggctgaaggcgggccggttcttcaccgatgccgaggtggaggcg
catcgcgcggtgggcgtggtcgaccagaaggcggccaaggcattgttcaacggcaatccg
atcggcggcacggtgctgctgggcggcatgccggtggaagtgatcggcgtggttggcccc
aacgcattcgccggcggagcgacgccgacggtgtatgtgccgtacacctccgcgtcctcg
cgtctgcttggcagccagcggctggagagcattaccgtacgcgtgcgggatgacgtgcca
accaccgccgctgaagcctcgctgggtgcggagctgcaacgcctgcacggccggcgtgat
ttcttcatctacaacgccgaccagatccgcaaggcggtgatgaagtccagccagaccatg
gcggcactggtttcggccattgcagcggtggcgctggtggtcggtggcgtgggggtgatg
aacatcatgctggtgtcggtgaaggagcgcgtgcgcgagatcggtgtgaggctggcggtg
ggtgcccgtcagggcgacatcctgcgccagttcctgatcgaggccgtgttgatctgcctg
ttcggcggggtactcggggtgttgttcgcgttggctgtgggcgccttgtccagcctgctg
tcgctgggggtgccgttcctgttcacgcctgggccggtgctcgccgcgctggcatgttcg
tctgccatcgggctcggtttcggctacttcccggcgcgcagtgccgcacagctcgacccg
atccaggcgttggcggcggagtag
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