Stenotrophomonas geniculata: RKE57_11880
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Entry
RKE57_11880 CDS
T09411
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgen03000
]
RKE57_11880
Transcription factors [BR:
sgen03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RKE57_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR
Fe_dep_repress
HTH_38
Motif
Other DBs
NCBI-ProteinID:
WNF08788
LinkDB
All DBs
Position
complement(2574860..2575636)
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AA seq
258 aa
AA seq
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MSSIPPSQGRLGRATPNPAAADDGDALHFCSTCAFSDACMSQGYDKTALGDLHVLVDHVG
PFHAGDYIFRAGESFDSIAAVRAGMVKTFVDDSQGNEQVLGFSLPGEVIGLNAIHGSRFP
CNAVALDTVHLCRISFPKLSLLATRMPGLQAKLFSLLSAEIGKVATLAANHRTEERMAAF
LLDMSERYARRGFSATRFNLTMARTEIANYLRMAPETASRVLRRLSDDGIIAVKQREILL
LQPERLAALAVADESDPN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattccgccttcgcagggccgtctcggccgggccacacccaaccccgccgcc
gccgatgatggcgacgcactgcacttctgcagcacctgtgcgttctccgacgcatgcatg
tcgcagggttacgacaagacagcactgggcgatctgcacgtgctggtggaccatgtcggt
ccgttccatgcgggtgactacattttccgcgctggcgaatcgttcgattcgattgctgcg
gtgcgcgctggcatggtcaagaccttcgtcgatgacagccagggcaacgagcaggtgctg
ggcttcagcctgccgggtgaagtgatcggcctcaacgcgatccacggttcacgctttccc
tgcaatgcggtggcgctggacaccgtgcacctgtgccgcatctcgttccccaagctcagc
ctgttggccacccgcatgccggggctacaggccaagctgttcagcctgctcagcgcggag
atcggcaaggtcgcgaccctggccgccaaccaccgtaccgaagaacgcatggctgcgttc
ctgctggacatgtccgagcgctacgcgcggcgcggcttttccgccacgcgcttcaacctg
acgatggcgcgtaccgagatcgccaattacctgcggatggcgccggaaaccgccagccgc
gtgctgcgccgcctgagcgatgatgggatcatcgcggtgaagcagcgcgagatcctgctg
ctgcagcccgagcgcctggcagcgctggcggtggccgacgaatccgatccgaactga
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