Stenotrophomonas geniculata: RKE57_11990
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Entry
RKE57_11990 CDS
T09411
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
sgen
Stenotrophomonas geniculata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
WNF08807
LinkDB
All DBs
Position
complement(2595895..2600637)
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AA seq
1580 aa
AA seq
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MLERLKTISCAVLAIVAVGCIAPAVVQAQESKITWRISQPGGDATQYKTQQAAVAGIKNL
PAPSPFPPEFQFGWQYVDKIKSKVVDLNGNTSITYWMGKTQPSDPDWTYYGAGDGGFLSE
EEVLEALIADLQDINPQCPGETAVPEGEWGPTAPGMDGISEVREYRVTGMLGSNSAESPC
VPFDAGTTGLARMRRLNCPIPFTQWSNKHNACVSEEFVATITSKSQKCDKDGGNGSCPMS
RNDTAANMSPLPDQDPASNGGTCDGNVGNPCDVKTGEKYEIAQDFDLGWIALTRFYHSGI
STSSGGFGYGWTHSLGAHLALDGVDSVGIIESTGFQRAFKKIGQAYEADDDSGDRLVQNG
NWTLYSAGSISTFGADGRLAAKRFPDGTSLTYIYDDSDRLAAVTHSSGRTLEFVYQSNDY
EALISSVLVEGIALATYTYTPQNQVATVTYAGGGVRTYHYENQDFPQHLTGITAEDGRRY
STFTYDSIGRVISSQHAGGADGVTLAYSPNGGAVVTDALGRQTDYTLTPGGDTAPSRKVT
GLTDSQGTVSRTYYDQSVDFRRRLDTYTDRRGIQTKHIYAQGTDPVSGRAVSIHTVTEAF
GLPEQRVVTTARDVETNAVLTTRIGSRETRTAFNSRRQPTANTVTDTASGQTRITNYTYC
EAADVAAAGSCPVEGLLKSVDGPRTDVADAVTYAYYSADDAGCATGGACTYRKGDLRSVT
NALGQTVETLAYDAFGRPLSVKDANGVVTDYTYHARGWPTSVTVRGATTAENRVTQISYW
PTGQVQQITEPDGSSVSYVYDAALRLTDIEDNAGNTIHYTLDNAGNRLKEDTLDAGGTLR
RTLARTFNTLGQLTALKDAGNHATGFAYDANGNPQTVTDALQRVTSQQYDPLNRLAQTLQ
DVGGVAAEIRSQYNALDQVTQVTDPKGLHTTYAYNGFGDLTGQVSPDSGASSFTVDAAGN
RKTATDARGITATYHYDALNRLIGIAYPDPNLDVGYSYDVAPAACAADERFAKGRLGQVL
HANGSTQYCHDRFGQVTRKVQTVNGVASTLRYAYSKTGRLTALTYPDGSVADYVRDTQGR
ISQIGLTRPGQARQIVVNNVTYAAFGPATGWTYGNGRQLQRPLDLDYRPQAVHDPAAGGL
SLGYGYDPVGSITELKNGAGSTVLAKYAYDTLGRLTQTQDGATGTPIETYAYDATGNRTA
LTTSAGTASYTYPATSHRLTAVDGEARNHDAVGNTTSIGGKTFTYNDANRMNAVKQGDAV
LESYAYNHRGERVLRTPAGGAAQITLYDEAGQWLGNYSATGQAQQQAIWLDNYPVALINT
PATGVPELAYVQPDHLGTPRVVIDPVRNVSIWEWSNKSEVFGNQIPSLDPDGDGVAFELA
LRFAGQQATDASGLFYNYRREYDPAVGRYTQSDPIGLMGGLNSFAYGSGDPTGRVDSLGL
ADKKYIPQAVPVSPELQAVGNRLQRLANQAASTIDATCGWRCSLPWIRGTLIHSEFKRLV
DTTCPTSQYATEVSYAGRRVVRYGYPGSSRADAVYGPVDAPQAIFDLKTGWAYISWDQYN
KYVKNLPEGTLVVELKPEGR
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacgactgaagaccatttcgtgtgccgtgctggcgattgttgccgttggctgc
attgcgccggctgttgtacaggcgcaggaaagcaagatcacctggcgtatttcccagccc
ggcggcgacgcgacccagtacaaaacccagcaggcggcggtggccggcatcaagaatctg
ccggcgcccagccccttcccgccggagttccagttcggctggcagtacgtcgacaagatc
aagtcgaaagtcgtggacttgaacggaaacacgtcgattacctactggatgggaaagacg
cagccctccgaccctgactggacttactacggcgcgggtgatggtggcttcttgtccgaa
gaggaagtgctggaagcgctcattgcagacttgcaggacatcaatccccagtgtcctggg
gaaactgctgtgccggaaggagaatggggcccaactgctccagggatggacggaatttcg
gaggtcagggagtaccgggtcaccggcatgctgggcagcaattcggcggagtctccgtgc
gtgcccttcgacgcaggaacgacagggcttgctcgcatgcgacgcttgaactgcccgatc
cccttcacgcagtggtccaacaagcacaacgcctgcgtcagcgaagaattcgttgcaact
atcacctcgaagtcgcagaagtgcgacaaggacggcggcaacggtagctgccccatgtcc
cgcaacgatacagctgcgaacatgagtccgttgcccgaccaggacccggcctccaacggc
ggtacctgcgacggcaatgtcggcaatccgtgtgacgtcaaaaccggcgagaaatacgaa
atcgcgcaggacttcgatctgggctggatcgcgctgacgcggttctatcactctggcatc
tccacgtcctccggcggcttcggctatggctggacccattcgctgggcgcccacctggca
ctggacggcgttgacagtgtgggcatcattgaaagcaccggtttccagcgcgcgttcaag
aagatcggccaagcctatgaggcggacgacgacagtggtgaccgtctggtccagaacggc
aactggacactgtactcggcgggctccatctcgaccttcggtgcggacgggcgtcttgcc
gccaagcgcttcccggatggcacgtcgctgacctacatctacgacgacagcgaccgcctt
gcggcggtcacccacagcagtggccgcacactggagttcgtttaccagtccaacgactat
gaggcgctgatcagttcggtgctggtcgaaggcattgcgctcgccacctatacctacacg
ccgcagaaccaggtcgccacggtgacctatgcgggtggtggtgtgcggacgtatcactac
gagaaccaggacttcccccagcacctgaccggcatcaccgccgaggacggtcgccgctac
agcacctttacctatgattccataggtcgtgtgatctccagtcagcatgccggcggtgcc
gatggcgtgacactggcctacagccccaatggtggtgcggtggtgaccgacgcgctgggg
cggcagaccgactacaccctgacacccggcggcgacaccgcgccgtcgcgcaaggtgacc
ggcctgacggattcgcagggaaccgtcagccggacctactacgaccagagtgtcgacttc
cgccggcgtctggatacctacaccgatcgccgcggcatccagaccaagcacatctatgcg
cagggcaccgacccggtgagtggtcgtgccgtcagcatccataccgtgaccgaagcgttc
ggcctgcccgagcagcgggtggtgaccactgcgcgcgacgtcgaaaccaatgcggtactg
accacccggatcggtagccgcgaaacccgcacggccttcaattcccgacgccagccgacg
gccaacaccgtgaccgacaccgcttccggtcagacgcgcatcaccaactacacgtactgc
gaagccgctgatgtggcagcggcaggcagctgcccggtggaggggctgctgaagagtgtg
gatggcccgcgcacggatgtggccgatgccgttacctatgcctattactcggcggatgat
gcagggtgcgcgacgggaggtgcctgcacctatcgcaagggcgacctgcgcagcgtgacc
aatgcgctgggccagacggtcgagactctggcctacgacgctttcgggcggccgttgtcg
gtcaaggatgccaacggcgtggtcaccgactacacctaccatgctcgcggctggccaacc
tcggtcaccgtacgtggcgcgaccactgccgagaatcgggtcacccagatcagctactgg
ccgaccggccaggtgcaacagatcaccgagcccgacggcagcagcgtttcctatgtctac
gatgcggcgctgcgcttgaccgatatcgaggacaacgcgggcaacacgattcactacacg
ctggacaatgccggcaatcgcctcaaggaagacacgctcgatgcaggcggtaccctgcgc
cgtaccctcgcacggacgttcaacacactcggccagctgaccgcactgaaggacgcaggc
aaccacgctaccggctttgcctacgatgctaacggcaacccgcagaccgtgaccgacgcc
ctgcagcgcgtgaccagccagcagtacgacccgctgaaccgcctggcccagaccttgcag
gacgtgggtggcgtggccgccgagatccgcagccagtacaacgcgctggaccaggtcacc
caggtcactgacccgaagggcctgcataccacctacgcctacaacggattcggtgacctg
accgggcaggtcagcccggacagtggcgccagcagcttcaccgtggacgccgccggcaac
cgcaagacggccaccgatgcacgcggcatcactgccacctatcactacgatgcactcaac
cgcctgatcggcatcgcctacccggaccccaatctggacgtgggctacagctatgacgtg
gcgccggccgcctgtgccgccgacgagcgctttgccaagggccgcctggggcaggtgctg
cacgccaatggcagcacccagtactgccatgaccgcttcggccaggtcacccgcaaggtg
cagaccgtcaatggtgtggccagcaccctgcgctatgcctacagcaagacgggtcgcttg
accgcgttgacctaccccgacggcagcgtggccgactacgtgcgcgatacccagggccgc
atcagccagatcggcctgacccgccccggccaggcgcgccagatcgtggtgaacaacgtg
acctatgcggccttcggcccggcgaccggctggacctatggcaatggccgccagctgcag
cgtccgctggacctggactatcgcccgcaagcggtgcatgacccggctgcaggcggcctg
tcgctgggctatggctatgatccggtcggctcgatcactgagctgaagaatggcgcaggc
tcgacggtgctggccaagtacgcctacgacacgctgggccgactgacccagacccaggac
ggcgcgaccggcacgccgattgaaacctatgcctatgacgccaccggcaatcgcactgcg
ctgaccacctcagcaggcaccgccagctacacctatcccgcaaccagccaccggctgacc
gccgtggatggcgaggcgcgcaaccatgacgcggtgggcaacaccaccagcatcggcggc
aagacgttcacctacaacgatgccaaccgcatgaacgccgtgaagcagggcgatgccgtg
ctggaaagttatgcctacaaccaccgcggcgagcgcgtgctgcgcaccccagccggtggt
gcggctcagatcaccctgtacgacgaggccgggcagtggctcggtaactactcggccacg
ggccaggcgcagcagcaggccatctggctggacaactatccggtggcgctgatcaacacg
ccggctaccggcgtgccggagctggcctacgtgcagccggatcatctgggcacgccgcgc
gtggtgatcgacccggtgcggaatgtctcgatatgggagtggagcaacaagagcgaggtg
ttcggcaaccagattccgagtcttgatccggatggcgatggtgtggcgttcgagttggcg
ctgcgcttcgccgggcagcaggcgacggatgcgagtgggctgttctacaactatcggagg
gaatacgacccggcagtggggcggtatacccagagcgatccgattgggttgatgggtgga
ctgaactcgttcgcgtatggaagcggagatcccactggccgtgtcgattcgctaggcttg
gccgataaaaaatacatacctcaggccgtacctgtttcaccggagttgcaggcggtcgga
aatcggctccagaggctggcaaaccaagcagcgtccaccattgacgccacctgtggatgg
cgttgctcactgccttggatacgcggaacgctcatccatagtgagttcaagcgcctggtg
gataccacatgcccgacgtctcagtatgcgactgaggtgagctacgctggccgtagggtt
gttaggtatgggtacccggggtcctcacgggcggacgctgtgtacggcccagttgatgcg
cctcaagccatcttcgatctgaagactggttgggcttacatctcctgggatcagtacaat
aagtacgtcaagaatctccccgagggaactctcgtggtggaacttaagcctgaaggccgt
tga
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integrated database retrieval system
