Stenotrophomonas geniculata: RKE57_12905
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Entry
RKE57_12905 CDS
T09411
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RKE57_12905 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgen03019
]
RKE57_12905 (orn)
03009 Ribosome biogenesis [BR:
sgen03009
]
RKE57_12905 (orn)
Messenger RNA biogenesis [BR:
sgen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RKE57_12905 (orn)
Ribosome biogenesis [BR:
sgen03009
]
Eukaryotic type
Pre-60S particles
RNases
RKE57_12905 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Annexin
Motif
Other DBs
NCBI-ProteinID:
WNF08976
LinkDB
All DBs
Position
complement(2797139..2797711)
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AA seq
190 aa
AA seq
DB search
MADTGAANERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLAEGPEFAIHHPLETLEA
MDEWNRNQHRRSGLWQRVVDSTTTLAQAEAQTVNFLAQWIPAGLSPMCGNSICQDRRFLH
RQMPRLEKYFHYRNLDVSTVKELAKRWAPTVAAGVGKNSNHTALSDVHDSIAELRHYRQF
MGALSGLSTP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggcgcggccaacgaacgactgatctggatcgacctggaaatgaccggg
ttggacaccgacaacgattcgatcatcgagatcgccaccgtggtcaccgatgcccagctc
aacgtgctggccgagggccctgaattcgccatccatcatccgctggaaacgctggaagcg
atggacgagtggaaccgcaaccagcatcgtcgttcgggcctgtggcagcgcgtggtggac
agcaccaccacgctggcccaggccgaggcgcagaccgtgaacttcctggcacagtggatt
ccggccggcctgtcgccgatgtgcggcaactcgatctgccaggaccgccgcttcctgcac
cgccagatgccgcgcctggagaagtatttccactaccgcaacctggacgtgtccacggtg
aaggaactggccaagcgatgggcgccgaccgtggccgccggcgtcggcaagaacagcaac
cacaccgcgctgagcgacgtgcacgactcgatcgccgagctgcgccactaccgccagttc
atgggggcgctttccggcctttcgacgccttga
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