Stenotrophomonas geniculata: RKE57_13500
Help
Entry
RKE57_13500 CDS
T09411
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgen03032
]
RKE57_13500 (gyrA)
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_13500 (gyrA)
Enzymes [BR:
sgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RKE57_13500 (gyrA)
DNA replication proteins [BR:
sgen03032
]
Prokaryotic type
DNA Topoisomerases
RKE57_13500 (gyrA)
DNA repair and recombination proteins [BR:
sgen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RKE57_13500 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WNF09086
LinkDB
All DBs
Position
complement(2909174..2911888)
Genome browser
AA seq
904 aa
AA seq
DB search
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN
KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT
NIPPHNLSESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV
RIRAKADIEVADNGRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRREV
VTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARVWEPGLVG
AMLGAAGAEASRPENLPKGVGLIEGGYQLTEIQATQILEMRLHRLTGLEQDRLTDEYKQL
LEVIAGLIHILEDPDRLLQVIREELVSVKAEFGDERRTEIRHSEEDLDILDLIAPEDVVV
TVSHAGYVKRQPVSVYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFTSSGKVFW
LPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPVREYADGQFVFFATKNGTVKKTPLG
EFAFRLARGKIAINLDEGDALVGVGLTDGERDILLFASNGKTVRFGEDKVRSMGRTATGV
RGIKMPAGEEVVSLIVAESAGGIEDENEDDNGVEEAAANGDAVIDGADDASVQYILTATE
NGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSSDEVLLISDGGTLVRTRG
SEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIEEDEDEVAAAAPATTDGAPAAASSED
AAQE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccaaggaaatcatccaggtcaacctggaagacgagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgcgctcccggatgcgcgcgacggc
ctcaagccggtgcatcgccgcgtgctgttcgcgatgaacgagttgaacgcgcacagcaac
aagccctacttcaagtcggcacgtatcgtcggtgacgtcatcggtaagtaccacccgcat
ggcgatcagtcggtgtacgacacgctggtgcgcctggcacagccgttctcgctgcgctac
atgctggtcgatggccagggtaacttcggctccatcgacggcgactccgccgcagcgatg
cgatacaccgaagcgcgcatgtcgcgcctcgcgcatgagctgatggccgacatcgacaag
gaaaccgtcgatttccagcccaactacgacgaaaaggaactggagccgacggtcatgccg
acccggttcccgaacctgctggtcaatggttcggccggtatcgcggtgggcatggcgacc
aacatcccgccgcacaatctgagcgaatcgatcaacgcctgcatcgcgctgatcgacaac
ccggaaatcgacgtcgacggcctgatggaatacatcccgggcccggatttcccgaccgcc
ggcatcatcaatggcaccgccggcatcgtcgccggctaccgcaccggccgtggccgcgtg
cgcatccgtgccaaggccgatatcgaagtggccgacaacggccgcgaatcgatcatcgtc
accgagattccttaccaggtgaacaaggcgcgtctgatcgagaagatcgccgagctggtc
aaggaaaagaagatcgaaggcatcagcgagctgcgcgatgagtccgacaaggacggcatg
cgcatctacatcgagatcaagcgcggtgaatctgccgaggttgtgctgaacaacctgtac
cagcagacgcagatggaatcggtgttcggcatcaacatggtggcgctggtcgatggccgc
ccgcagttgatgaacctcaagcagatgctggaggcgttcgtccgccaccgtcgcgaagtg
gtcacccgccgcaccgtgttcgagctgcgcaaggcgcgtgcccgtgcccacgtgctggaa
ggcctgaccgtcgcgctggccaacatcgacgagatgatcgaactgatcaagacctcgccg
aacccgaacgaagcacgcgagcgcatgctggcgcgcgtgtgggagccgggcctggtcggt
gcgatgctgggcgccgccggtgccgaagcctcgcgtccggaaaacctgcccaagggcgtg
ggcctgatcgagggcggctaccagctgaccgagatccaggccacccagatcctggaaatg
cgcctgcaccgcctgaccgggctggagcaggaccgcctgaccgacgagtacaagcagctg
ctggaagtgatcgccgggctgatccacatcctggaagaccccgaccgcctgctgcaggtg
atccgcgaagagctggtcagcgtcaaggccgagttcggcgacgagcgtcgtaccgagatc
cgccacagcgaagaagacctggacatcctcgacctgatcgcgccggaagacgtggtggtc
accgtgtcgcacgccggttacgtgaagcgccagccggtgagcgtgtaccgcgcgcagcgc
cgtggcggccgtggccgcagtgcggcggcgaccaaggaagaggatttcatcgaacagctg
tggctggtcaacacgcatgacacgctgctgaccttcaccagttcgggcaaggtgttctgg
ctgccggtctaccagctgcccgaagccggttccaacgctcgtggccgtccgatcatcaac
tggattccgctggaaccgggcgaacgcgtgcaggccgtgctgccggtgcgcgagtacgcc
gatggccagttcgtgttcttcgccacgaagaacggtacggtcaagaagaccccgctgggc
gagttcgccttccgtctggcccgcggcaagatcgcgatcaacctcgacgagggcgacgcg
ctggttggcgtcggcctgaccgacggcgagcgcgacatcctgctgttcgcctccaacggc
aagaccgtgcgcttcggcgaggacaaggtccgctcgatgggccgtaccgcgaccggcgtg
cgtggcatcaagatgccggccggcgaggaagtggtcagcctgatcgtggccgaaagtgcc
ggtggcatcgaggacgagaacgaggacgacaacggtgtcgaagaagccgccgccaatggc
gatgcggtgatcgacggcgctgacgacgccagcgtgcagtacatcctcaccgccaccgag
aacggctatggcaagcgcaccccgctgccggactacccgcgcaagggccgtggtacgcag
ggcgtgatcggcatccagaccaccgagcgcaacggcaagctggtcgccgcggtgctgatg
ggctccagcgacgaagtcctgctgatctccgatggcggcaccctggtgcgtacgcgtggc
tcggaaatcagccgcgtcggccgcaacacccagggcgtcaccctgatccgcctgtccaag
gacgagaagctgcaggcggtggagcgcatggatgcctccatcgaagaggacgaggacgag
gtggcggctgccgccccggccacgaccgacggcgccccggctgcggccagcagcgaggac
gccgctcaggagtga
DBGET
integrated database retrieval system
