Stenotrophomonas geniculata: RKE57_14080
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Entry
RKE57_14080 CDS
T09411
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgen03009
]
RKE57_14080
Enzymes [BR:
sgen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RKE57_14080
Ribosome biogenesis [BR:
sgen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RKE57_14080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
WNF09196
LinkDB
All DBs
Position
3042716..3044350
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AA seq
544 aa
AA seq
DB search
MSDTPRNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEVAQTG
MSVKSGDKIELDGRGFVATALAEPSRVLVYNKPEGEVTTRDDPEGRPTVFESLPPLKGAR
WIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDAIVDRLT
RGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGK
VSLPRELARGHSVELGTTQVEALRAQLKLEEGAPSALTLQPVIGQRRAAKTTVRVREGGR
GNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKPFKQR
AQKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGGQGRPYGKPK
GPGAGAGGGQGRGGFGGEGRGGAGGQGRPAGAGNRSQGQGNKHPYGHPGNAPSFPSDHAT
PGFNPYGSPKPAQGARPGGRGPGGGNRGPGGNRGPGGPGSNRGPGGPGGNRGPGGPRRSG
PRGG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaacaagctctcgctgaagcgcgaagccacctccgaacagttc
aagctggaagagcgcctgcacaaggtgctggcccaggccggcctcggctcgcgccgcgcg
ctggaacagcgcatcgccgaaggcctggtcaaggtcaacggtgaagtcgcgcagaccggc
atgtcggtcaagagtggcgacaagatcgagctggatggccgtggcttcgtcgccaccgcc
ctggccgagccgtcgcgcgtgctggtctacaacaagccggaaggcgaagtgaccacccgc
gatgatccggaaggccgccccaccgtattcgaatcgctgccaccgctgaagggcgcgcgc
tggatcgcgatcggccgcttggacatcaacaccaccggcctgctgctggccaccaccgac
ggtgaactggccaacgccatgatgcacccgtcgttcgaggtcgagcgcgaatacgtggtc
cgcgtgcgtgcgccggaaggcgaggaaaaggtctccgacgccatcgtcgaccgcctcacc
cgtggcgtggcactggaagacggcccggccaagttcgacgagatcgaacgcatcggcggc
accgactcgcacgactggttccgcgtcgtggtgaaggaaggccgcaaccgcgaagtgcgc
cgcctgtgggaatcgcagggctgccaggtcagccgcctgaagcgcacccgctacggcaag
gtgagcctgccgcgcgaactggcccgcggccattcggtggaactgggcaccacgcaggtt
gaagccctgcgcgcgcagctgaagctggaagaaggcgcgccgtcggcactgacgctgcag
ccggtgatcggccagcgccgcgccgccaagaccaccgtgcgcgtgcgcgaaggtggccgc
ggcaacgcctacgtcaacggccacaacaccgccgacgagggccgcgagctgcgtcgtttc
gataacgtccgcgaagaccgcggccgtggtcgcggcggcaagggcggcggcttcaagggt
ggcctgacggtcagcggtgaagcggcagccaagcagtcgcagaagccgttcaagcagcgc
gcccagaagaacgaccgttcgctgccggaaggcaacccggccgcgttccgcacctggtac
gtgccggatggcgtgagcaccggcccgagcggccatcgcaatgccggcccgggcgcacgt
ggccccggtgcccgtggtccgggcgcaggcggccagggccgtccgtatggcaagccgaag
ggtccgggcgcaggcgccggtggcggccagggccgtggcggtttcggcggtgaaggccgt
ggcggcgcaggcggccagggtcgtccggccggtgcgggcaaccgctcgcagggccagggc
aacaagcacccgtacggccatccgggcaatgccccgagcttcccgtccgaccacgccacg
ccgggcttcaacccgtatggcagcccgaagcccgcacagggcgcccgtccgggcggtcgc
ggtccgggcggcggcaaccgcggtccgggcggtaatcgcggcccgggtggtccgggtagc
aaccgtggcccgggtggccccggcggcaaccgcggtccgggcggcccgcgccgcagcggc
ccgcgcggcggctga
DBGET
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