Stenotrophomonas geniculata: RKE57_14940
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Entry
RKE57_14940 CDS
T09411
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgen01011
]
RKE57_14940
Enzymes [BR:
sgen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RKE57_14940
Peptidoglycan biosynthesis and degradation proteins [BR:
sgen01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RKE57_14940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
SLT_2
Motif
Other DBs
NCBI-ProteinID:
WNF09353
LinkDB
All DBs
Position
complement(3211038..3212642)
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AA seq
534 aa
AA seq
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MPVPVLISRGWPLLALAGLVSLAPDAHAQRVSARDKVKVDALQQRMTVAEKRYSDALLLV
ANADPKGSNEADAALEDMEDVLNDCVKQKGCQMGTLLASYKRLLKHDADAAASDDVADEG
GDRLEADPDHIGPLTADVPEAARAAALLNDKRHAFDSMVEYNPAVQAGIRRWLTDMRPAL
LTSYENYQNLRVVMWPEWEKRGLPEALLFGIMAKESNGRVHASSRAGAAGLMQFMPATGR
RFGLGPDGTGFDTRFDARSAAEASASYLNERLRELNNNVEMSVAAYNGGEGRAARVFKQS
AGQSFWTDSVYNQFPGETKDYVPMVIAAAWIFLHPQQYGVEFPKISAQPATLRLAKSTTI
YELTICLGSHGTRDGYMRALRNLNPRYEADGWIPAGTLINATTRIAGLYQRNCVSGPRAD
LARTLITADLNAAIKRPTAASYTGSVAVGGVVPVADAAASTSVPTTPAAPVATPRPPARP
KPVRSHKVGRGETLGAIAAKFQCDVPTLARANGLKAPAYSLRHGQTLKLQGCDK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttcctgtcctgatttcccgcggttggccgctgctggccctggccggcctggtt
tccctggcgcccgacgcccatgcgcagcgggtttcggcccgggacaaggtgaaggtggat
gcgctgcagcagcgcatgaccgtcgccgaaaagcgttacagcgacgccctgctgctggtc
gccaatgccgaccccaagggcagcaacgaggccgatgccgcgctggaagacatggaagat
gtcctcaacgactgcgtgaagcagaagggctgccagatgggcaccctgcttgccagctac
aagcgcctgctcaagcacgacgctgatgccgctgccagcgacgacgtggccgacgagggc
ggtgaccgcctggaagccgaccccgaccatatcggcccgctcaccgccgacgtgccggag
gccgcgcgcgccgccgcgctgctcaacgacaagcggcatgccttcgacagcatggtcgag
tacaacccggccgtgcaggccggcatccgccgttggctgaccgacatgcgtcccgcgctg
ctgaccagctacgagaactaccagaacctgcgtgtggtgatgtggccggagtgggagaag
cgcggcctgcccgaggcgctgctgttcggcatcatggccaaggagtccaacggccgcgtg
catgcgtcctcgcgcgccggcgccgccggcctgatgcagttcatgccggccaccggtcgc
cgcttcggcctcggcccggacggcaccggcttcgatacgcgctttgacgcgcgcagcgcc
gccgaggccagcgccagttacctcaacgagcgtctacgcgagctgaacaacaacgtggaa
atgtcggtggccgcctacaacggtggtgaaggccgtgccgcgcgcgtgttcaagcagagt
gctggccagagcttctggaccgacagcgtctacaaccagttcccgggcgagaccaaggac
tacgtgccgatggtgatcgccgccgcctggatcttcctgcacccgcagcagtacggcgtg
gaattcccgaagatcagcgcgcagccggccacgctgcgcctggccaagtccactaccatc
tacgaactgaccatctgcctgggcagccacggcacccgcgatggctacatgcgcgcgctg
cgcaacctcaacccgcgctatgaagccgacggctggattccggccggcacgctgatcaat
gccaccacccgcatcgccggcctgtaccagcgcaactgcgtcagcggcccgcgtgccgat
ctggcccgcacgctgatcaccgccgatctgaacgcagcgatcaagcgtccgaccgctgcc
agctacaccggcagcgtggccgtgggcggtgtggtgccggtggccgatgccgccgcgtcc
accagcgtgccgaccacaccggccgctccggtagctacgccgcgcccgccggcacggccg
aagccggtgcgcagccacaaggtgggccggggtgagaccctgggcgccatcgccgcgaaa
ttccagtgcgacgtgccgaccctggcccgcgccaacggcctgaaggccccggcctacagc
ctgcgccacggccagacgctgaagctgcagggctgcgacaagtaa
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